Job Description P39408 Confidence 98.93% Date Thu Jan 5 12:00:44 GMT 2012 Rank 79 Aligned Residues 243 % Identity 15% Template c3fdgA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:dipeptidase ac. metallo peptidase. merops family m19; PDBTitle: the crystal structure of the dipeptidase ac, metallo peptidase. merops2 family m19 Resolution 1.80 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.														.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.																							.	.	.	.	.	.
Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		F	I	D	T	H	C	H	F	D	F	P	P	F	S	G	D	E	E	A	S	.	.	.	.	.	.	.	.	.	.	.	.	.	L	Q	R	A	A	Q	A	G	V	G	K	I	I	V	P	A	T	E	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	N	F	A	R	V
Query Conservation																						.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	F	D	G	H	N	D	F	L	L	R	L	L	R	N	P	A	N	R	E	T	I	W	L	K	G	D	G	T	G	H	L	D	L	P	R	M	K	E	G	G	F	A	G	G	F	F	A	I	Y	V	P	S	P	P	F	E	L	P	L	P	P	M	I	R	A	E	Q	A	Q	P	V	A	L	A	M	A	G	H	L
Template Known Secondary structure																	G	G	G							T			S		S	S										T
Template Predicted Secondary structure
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		50	.	.	.	.	.	.	.	.	.	60	.	.													.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.
Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.	.																																																		.	.	.	.	.	.
Query SS confidence															.	.	.	.	.	.	.	.	.	.	.	.																																																		.	.	.	.	.	.
Query Sequence		L	A	L	A	E	N	Y	Q	P	L	Y	A	A	.	.	.	.	.	.	.	.	.	.	.	.	L	G	L	H	P	G	M	L	E	K	H	S	D	V	S	L	E	Q	L	Q	Q	A	L	E	R	R	P	A	K	V	V	A	V	G	E	I	G	L	D	L	F	G	D	D	P	Q	F	E	R	.	.	.	.	.	.
Query Conservation															.	.	.	.	.	.	.	.	.	.	.	.																																																		.	.	.	.	.	.
Alig confidence															.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.																					.	.	.	.	.	.
Template Conservation																																																				.	.	.	.
Template Sequence		L	W	M	E	R	A	A	R	G	R	F	K	V	C	R	T	A	A	E	V	R	S	C	H	A	D	G	I	V	S	G	I	M	H	M	E	G	A	E	A	I	G	A	D	L	D	A	L	H	L	.	.	.	.	F	H	S	L	G	L	R	S	L	G	P	V	W	S	R	P	T	V	F	G	H	G	V	P	F	R
Template Known Secondary structure									T	T	S						S											T										S		T	T	S		T	T							.	.	.	.					T						S		S	S	S			S	S			B
Template Predicted Secondary structure																																																				.	.	.	.
Template SS confidence
		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.					.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
												112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.										.	.	.	.	.	.	.	.	170	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.																																																			.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.																																																			.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	Q	Q	W	L	L	D	E	Q	L	K	L	A	K	R	Y	D	L	P	V	I	L	H	S	R	R	T	H	D	K	L	A	M	H	L	K	R	H	D	L	P	R	T	G	V	V	H	G	F	S	G	.	.	.	.	.	.	.	.	.	S	L	Q	Q	A	E	R	F	V	Q	L
Query Conservation		.	.	.	.	.	.	.	.	.	.																																																			.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.																						.	.																												.	.	.	.	.	.	.	.	.
Template Conservation																																	.	.
Template Sequence		F	P	G	S	P	D	T	G	E	G	L	T	E	A	G	R	R	L	V	A	E	C	N	R	L	K	I	M	L	D	L	.	.	S	H	L	N	E	K	G	F	D	D	V	A	R	L	S	D	A	P	L	V	A	T	H	S	N	A	H	A	V	T	P	S	T	R	N	L	T	D	R	Q	L	A	M	I	R	E	S
Template Known Secondary structure			S			S			S																		T						.	.	T	T	B													S	S					S	S			B	T	T	T	S			T	T	S	B											T
Template Predicted Secondary structure																																	.	.
Template SS confidence
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.			.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.															.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	Y	K	I	G	V	G	G	T	I	T	Y	P	R	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	K	T	R	D	V	I	A	K	L	P	L	A	S	L	L	L	E	T	D	A	P	D	M	P	L	N	G	F	Q	G	Q	P	N	R	P	E	Q	A	A	R	V	F	A	V	L	C	E	L	R	R
Query Conservation																	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.																							.
Template Conservation																																																							.	.	.																							.
Template Sequence		R	G	M	V	G	L	N	F	A	T	S	F	L	R	E	D	G	R	R	S	A	E	M	G	W	E	P	V	L	R	H	L	D	H	L	I	D	R	L	G	E	D	H	V	G	M	G	S	D	F	D	G	A	.	.	.	T	I	P	Q	G	I	A	D	V	T	G	L	P	A	L	Q	A	A	M	R	A	H	.	G
Template Known Secondary structure		T													S	T	T									S																T	T	S							B	T	T	S	.	.	.				T	T	T		S	G	G	G												.	T
Template Predicted Secondary structure																																																							.	.	.																							.
Template SS confidence
		256	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.				.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330		.
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	P	A	D	E	I	A	Q	A	L	L	N	N	T	Y	T	L	F	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	D	E	P	L	M	R	K	L	C	H	E	N	W	Y	G	L	L	E
Template Known Secondary structure												T
Template Predicted Secondary structure
Template SS confidence
		332	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions