Job Description P39408 Confidence 99.36% Date Thu Jan 5 12:00:44 GMT 2012 Rank 55 Aligned Residues 253 % Identity 17% Template c3e0lB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:guanine deaminase; PDBTitle: computationally designed ammelide deaminase Resolution 2.37 Å

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		5	.	.	.	.	10	.	.																															.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.
Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		F	I	D	T	H	C	H	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	F	P	P	F	S	G	D	E	E	A	S	L	Q	R	A	A	Q	A	G	V	G	K	I	I	V	P	A	T	E	A	E	N	F	A	R	V	L	A	L	A	E
Query Conservation										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	V	D	T	H	I	H	A	S	Q	Y	S	F	A	G	S	S	I	D	L	P	L	L	E	W	L	T	K	Y	T	F	P	A	E	H	R	F	Q	N	I	D	F	A	E	E	V	Y	T	R	V	V	R	R	T	L	K	N	G	T	T	T	A	C	Y	F	A	T	I	H	T	D	S	S	L	L	L	A	D	I	T
Template Known Secondary structure									G	G	G	G	G	G	T	T	S				S									T							G	G	G	S																	T	T	T										S
Template Predicted Secondary structure
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
		55	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.			.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.
Predicted Secondary structure																																																						.	.
Query SS confidence																																																						.	.
Query Sequence		N	Y	Q	P	L	Y	A	A	L	G	L	H	P	G	M	L	E	K	H	S	D	V	S	L	E	Q	L	Q	Q	A	L	E	R	R	P	A	K	V	V	A	V	G	E	I	G	L	D	L	F	G	D	D	.	.	P	Q	F	E	R	Q	Q	W	L	L	D	E	Q	L	K	L	A	K	R	Y	D	L	P	V	I	L
Query Conservation																																																						.	.
Alig confidence																																																						.	.
Template Conservation
Template Sequence		D	K	F	G	Q	R	A	F	V	G	K	V	C	M	D	L	N	D	T	F	P	E	Y	K	E	T	T	E	E	S	I	K	E	T	E	R	F	V	S	E	M	L	Q	K	N	Y	S	R	V	K	P	I	V	T	P	G	N	G	V	S	E	T	L	M	G	E	L	G	N	I	A	K	T	R	D	L	H	I	Q	S
Template Known Secondary structure					T											S			S	S	S	T	T	S																				T	T			S	S									S	S																T	T
Template Predicted Secondary structure
Template SS confidence
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
		133	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150																.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180				.	.	.	.	.	.	.	.	.	190	.	.	.	.
Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.
Query SS confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.
Query Sequence		H	S	R	R	T	H	D	K	L	A	M	H	L	K	R	H	D	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	R	T	G	V	V	H	G	F	S	G	S	L	Q	Q	A	E	R	F	V	Q	L	G	Y	K	I	G	V	G	G	.	.	.	T	I	T	Y	P	R	A	S	K	T	R	D	V	I
Query Conservation																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.
Alig confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.
Template Conservation
Template Sequence		H	I	S	E	N	R	D	E	V	E	A	V	K	N	L	Y	P	S	Y	K	N	Y	T	S	V	Y	D	K	N	N	L	L	T	N	K	T	V	M	A	H	G	C	Y	L	S	A	E	E	L	N	V	F	H	E	R	G	A	S	I	A	H	C	P	N	S	N	L	S	L	S	S	G	F	L	N	V	L	E	V	L
Template Known Secondary structure				S		S											S	T	T	S	S	S							T	T	T			S	T	T							T	T													T													T	T
Template Predicted Secondary structure
Template SS confidence
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
		195	.	.	.	.	200	.	.	.	.	.	.	.	.		.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																.
Query SS confidence																.
Query Sequence		A	K	L	P	L	A	S	L	L	L	E	T	D	A	.	P	D	M	P	L	N	G	F	Q	G	Q	P	N	R	P	E	Q	A	A	R	V	F	A	V	L	C	E	L	R	R	E	P	A	D	E	I	A	Q	A	L	L	N	N	T	Y	T	L	F	N	V	P
Query Conservation																.
Alig confidence							.	.								.
Template Conservation							.	.
Template Sequence		K	H	E	V	K	.	.	I	G	L	G	T	D	V	A	G	G	Y	S	Y	S	M	L	D	A	I	R	R	A	V	M	V	S	N	I	L	L	I	N	K	V	N	E	K	S	L	T	L	K	E	V	F	R	L	A	T	L	G	G	S	Q	A	L	G	L	D
Template Known Secondary structure			T	T			.	.							T	T	T	S																						T	T	S	S	S	S												T							T	T		T
Template Predicted Secondary structure							.	.
Template SS confidence
		318	.	320	.	.			.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions