Job Description P39408 Confidence 97.71% Date Thu Jan 5 12:00:44 GMT 2012 Rank 135 Aligned Residues 242 % Identity 18% Template c2z00A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:dihydroorotase; PDBTitle: crystal structure of dihydroorotase from thermus thermophilus Resolution 2.42 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.			20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.							.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
Predicted Secondary structure																	.	.																							.	.	.	.	.	.
Query SS confidence																	.	.																							.	.	.	.	.	.
Query Sequence		F	I	D	T	H	C	H	F	D	F	P	P	F	S	G	.	.	D	E	E	A	S	L	Q	R	A	A	Q	A	G	V	G	K	I	I	V	P	A	T	.	.	.	.	.	.	E	A	E	N	F	A	R	V	L	A	L	A	E	N	Y	Q	P	L	Y	A	A	L	G	L	H	P	G	M	L	E	K	H	S	D	V
Query Conservation																	.	.																							.	.	.	.	.	.
Alig confidence																	.	.																							.	.	.	.	.	.
Template Conservation
Template Sequence		F	L	D	L	H	A	H	L	R	E	P	G	E	E	V	K	E	D	L	F	S	G	L	L	A	A	V	R	G	G	Y	T	D	L	V	S	X	P	N	T	K	P	P	V	D	T	P	E	A	V	R	A	L	K	E	K	A	K	A	L	G	L	A	R	L	H	P	A	A	A	L	T	E	K	Q	E	G	K	T	L
Template Known Secondary structure											T	T	T		T	T	T													T	T								S		S	S	S		S		S															T	S	S								S	B	G	G	G		S	S	S	B
Template Predicted Secondary structure
Template SS confidence
		51	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Predicted Secondary structure																																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	L	E	Q	L	Q	Q	A	L	E	R	R	P	A	K	V	V	A	V	G	E	I	G	L	D	L	F	G	D	D	P	Q	F	E	R	Q	Q	W	L	L	D	E	Q	L	K	L	A	K	R	Y	D	L	P	V	I	L	H	S	R	R	T	H	D	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence									.	.	.	.	.	.	.	.	.	.	.	.	.																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation									.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	P	A	G	L	L	R	.	.	.	.	.	.	.	.	.	.	.	.	.	E	A	G	A	V	L	L	T	D	D	G	R	T	N	E	D	A	G	V	L	A	A	G	L	L	X	A	A	P	L	G	L	P	V	A	V	H	A	E	D	A	G	L	R	R	N	G	V	X	N	D	G	P	L	A	D	L	L	G	L
Template Known Secondary structure									.	.	.	.	.	.	.	.	.	.	.	.	.			T							T	T	S																G	G	G	T														T	T		S				S							T
Template Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		131	.	.	.	.	.	.														.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
																					141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.		.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	A	M	H	L	K	R	H	D	L	P	R	T	G	V	V	H	G	F	S	G	.	S	L	Q	Q	A	E	R	F	V	Q	L	G	Y	K	I	G	V	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	G	N	P	P	E	A	E	A	A	R	I	A	R	D	L	E	V	L	R	Y	A	L	R	R	S	P	A	T	P	R	L	H	V	Q	H	L	S	T	K	R	G	L	E	L	V	R	E	A	K	R	A	G	L	P	V	T	A	E	A	T	P	H	H	L	T	L	T	E	E	A	L	R	T	F	D	P	L	F	K
Template Known Secondary structure																												S	S							T	T																T	T																G	G	G	G	G	G			G	G	G
Template Predicted Secondary structure
Template SS confidence
		198	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.
		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.									.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250
Predicted Secondary structure																						.																		.	.	.	.	.	.	.	.
Query SS confidence																						.																		.	.	.	.	.	.	.	.
Query Sequence		G	T	I	T	Y	P	R	A	S	K	T	R	D	V	I	A	K	L	P	L	.	A	S	L	L	L	E	T	D	A	P	D	M	P	L	N	G	F	.	.	.	.	.	.	.	.	Q	G	Q	P	N	R	P	E	Q	A	A	R	V	F	A	V	L	C	E	L	R	R	E	P	A	D	E	I	A	Q	A	L	L	N
Query Conservation																						.																		.	.	.	.	.	.	.	.
Alig confidence																						.																		.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	A	P	P	L	R	G	E	E	D	R	E	A	L	L	E	G	L	L	D	G	T	L	D	A	I	A	T	D	H	A	P	H	T	L	A	E	K	E	K	D	L	L	R	A	P	F	G	I	P	S	L	E	V	A	F	P	L	L	Y	T	E	L	H	L	K	R	G	F	P	L	Q	R	L	V	E	L	F	T	D
Template Known Secondary structure			S	S																		T	S	S							B					T	T	G	G	G	S		T	T	T	S				B			T	T	T									T																T
Template Predicted Secondary structure
Template SS confidence
		278	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.
		251	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	T	Y	T	L	F	N	V	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	P	R	R	V	L	G	L	P
Template Known Secondary structure								T
Template Predicted Secondary structure
Template SS confidence
		358	.	360	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions