Job Description P39408 Confidence 94.36% Date Thu Jan 5 12:00:44 GMT 2012 Rank 145 Aligned Residues 109 % Identity 28% Template c2ubpC_ PDB info PDB header:hydrolase Chain: C: PDB Molecule:protein (urease alpha subunit); PDBTitle: structure of native urease from bacillus pasteurii Resolution 2.00 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.											.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
Predicted Secondary structure																																							.	.	.	.	.	.	.	.	.	.
Query SS confidence																																							.	.	.	.	.	.	.	.	.	.
Query Sequence		F	I	D	T	H	C	H	F	D	F	P	P	F	S	G	D	E	E	A	S	L	Q	R	A	A	Q	A	G	V	G	K	I	I	V	P	A	T	.	.	.	.	.	.	.	.	.	.	E	A	E	N	F	A	R	V	L	A	L	A	E	N	Y	Q	P	L	Y	A	A	L	G	L	H	P	G	M	L	E	K	H	S
Query Conservation																																							.	.	.	.	.	.	.	.	.	.
Alig confidence														.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.																								.	.	.	.
Template Conservation														.	.	.	.	.	.	.																																																				.	.	.	.
Template Sequence		G	I	D	T	H	V	H	F	I	N	P	D	.	.	.	.	.	.	.	Q	V	D	V	A	L	A	N	G	I	T	T	L	F	G	G	G	T	G	P	A	E	G	S	K	A	T	T	V	T	P	G	P	W	N	I	E	K	M	L	K	S	T	E	G	L	P	I	N	V	G	.	.	.	.	I	L	G	K	G	H
Template Known Secondary structure												T	T	.	.	.	.	.	.	.								T	T									S	S	S							S	S																T	T		S	S				.	.	.	.		B
Template Predicted Secondary structure														.	.	.	.	.	.	.																																																				.	.	.	.
Template SS confidence
		133	.	.	.	.	.	.	140	.	.	.	.								.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.					.	.	.	.	200	.
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	V	S	L	E	Q	L	Q	Q	A	L	E	R	R	P	A	K	V	V	A	V	G	E	I	G	L	D	L	F	G	D	D	P	Q	F	E	R	Q	Q	W	L	L	D	E	Q	L	K	L	A	K	R	Y	D	L	P	V	I	L	H	S	R	R
Query Conservation
Alig confidence															.	.	.	.	.	.	.	.							.	.	.	.
Template Conservation															.	.	.	.	.	.	.	.							.	.	.	.
Template Sequence		G	S	S	I	A	P	I	M	E	Q	I	D	A	.	.	.	.	.	.	.	.	G	A	A	G	L	I	.	.	.	.	H	E	D	W	G	A	T	P	A	S	I	D	R	S	L	T	V	A	D	E	A	D	V	Q	V	A	I	H	S	D	T
Template Known Secondary structure			S	S	S									T	.	.	.	.	.	.	.	.	T			B			.	.	.	.	B	G	G	G																		T		B				B			T
Template Predicted Secondary structure															.	.	.	.	.	.	.	.							.	.	.	.
Template SS confidence
		202	.	.	.	.	.	.	.	210	.	.	.	.									.	.	.	.	.	220					.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions