Job Description P39408 Confidence 98.36% Date Thu Jan 5 12:00:44 GMT 2012 Rank 116 Aligned Residues 231 % Identity 14% Template c2q01A_ PDB info PDB header:isomerase Chain: A: PDB Molecule:uronate isomerase; PDBTitle: crystal structure of glucuronate isomerase from caulobacter crescentus Resolution 2.34 Å

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		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.																			.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	A	Q	A	G	V	G	K	I	I	V	P	A	T	E	A	E	N	F	A	R	V	L	A	L	A	E	N	Y	Q	P	L	Y	A	A	L	G	L	H	P	G	M	L	E	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	S	D	V	S	L	E	Q	L	Q	Q	A	L	E	R	R	P
Query Conservation																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		F	D	R	F	N	I	E	T	L	A	T	T	E	G	P	H	E	S	L	Q	H	H	A	A	I	R	E	S	G	W	G	G	H	V	I	T	A	Y	R	P	D	A	V	I	D	F	E	D	E	R	S	P	R	A	F	E	R	F	A	E	T	S	G	Q	D	V	Y	S	W	K	S	Y	L	E	A	H	R	L	R	R
Template Known Secondary structure					T	T								B		T	T	S											S	S									B				T	T	T		T	T		T	T													T	S		T	T	S
Template Predicted Secondary structure
Template SS confidence
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.																											.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.
Predicted Secondary structure																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.
Query SS confidence																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.
Query Sequence		A	K	V	V	A	V	G	E	I	G	L	D	L	F	G	D	D	P	Q	F	E	R	Q	Q	W	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	L	D	E	Q	L	K	L	A	K	R	Y	D	L	P	V	I	L	H	S	R	.	.	.	.	.	.	.	.
Query Conservation																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.
Alig confidence																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Q	A	F	I	D	A	G	A	T	S	S	D	H	G	H	P	T	A	A	T	A	D	L	S	D	V	E	A	E	A	L	F	N	S	L	V	K	G	D	V	T	P	E	K	A	E	L	F	R	A	Q	M	L	T	E	M	A	K	M	S	L	D	D	G	L	V	M	Q	I	H	P	G	S	H	R	N	H	N	V	G
Template Known Secondary structure							T	T									S	S																					T
Template Predicted Secondary structure
Template SS confidence
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
																			136	.	.	.	140	.	.	.	.	.	.	.	.				.	150	.	.	.	.	.	.	.	.	.	160	.		.	.	.	.	.	.	.	.	170	.	.			.	.	.	.	.	.	.	180	.	.	.	.	.	.	.				.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.														.												.	.																.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.														.												.	.																.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	T	H	D	K	L	A	M	H	L	K	R	H	.	.	.	D	L	P	R	T	G	V	V	H	G	F	S	G	.	S	L	Q	Q	A	E	R	F	V	Q	L	.	.	G	Y	K	I	G	V	G	G	T	I	T	Y	P	R	A	.	.	.	S	K
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.														.												.	.																.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.														.												.	.																.	.	.
Template Conservation
Template Sequence		L	L	N	S	H	G	R	D	K	G	A	D	I	P	M	R	T	E	Y	V	D	A	L	K	P	L	L	T	R	L	G	N	D	P	R	L	S	I	I	L	F	T	L	D	E	T	T	Y	S	R	E	L	A	P	L	A	G	H	Y	P	V	L	K	L	G	P	S	W	W	F	H	D	S	P	E	G	M	M	R	F
Template Known Secondary structure						T		S	S	S	S										T	T	T	S								T	T		T	T								S		T	T					T						T	T		T	T								G	G	G		S
Template Predicted Secondary structure
Template SS confidence
		318	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.
		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.					.	.	.	.	.	.	250	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																								.	.	.	.
Query SS confidence																																																								.	.	.	.
Query Sequence		T	R	D	V	I	A	K	L	P	L	A	S	L	L	L	E	T	D	A	P	D	M	P	L	N	G	F	Q	G	Q	P	N	R	P	E	Q	A	A	R	V	F	A	V	L	C	E	L	R	R	E	P	A	D	E	.	.	.	.	I	A	Q	A	L	L	N	N	T	Y	T	L	F	N	V
Query Conservation																																																								.	.	.	.
Alig confidence																																																								.	.	.	.
Template Conservation
Template Sequence		R	E	Q	V	T	E	T	A	G	F	Y	N	T	V	G	F	N	D	D	T	R	A	F	L	S	I	P	A	R	H	D	V	A	R	R	V	D	S	A	F	L	A	R	M	V	A	E	H	R	M	D	L	V	E	A	E	E	L	I	V	D	L	T	Y	N	L	P	K	K	A	Y	K	L
Template Known Secondary structure											S	T	T	B								S		G	G	G																						T	T	S	S														T							T	T
Template Predicted Secondary structure
Template SS confidence
		398	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions