Job Description P39408 Confidence 54.66% Date Thu Jan 5 12:00:44 GMT 2012 Rank 179 Aligned Residues 148 % Identity 12% Template c2infB_ PDB info PDB header:lyase Chain: B: PDB Molecule:uroporphyrinogen decarboxylase; PDBTitle: crystal structure of uroporphyrinogen decarboxylase from2 bacillus subtilis Resolution 2.30 Å

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		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.								.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
Predicted Secondary structure																																	.	.	.	.	.	.	.
Query SS confidence																																	.	.	.	.	.	.	.
Query Sequence		L	E	Q	L	Q	Q	A	L	E	R	R	P	A	K	V	V	A	V	G	E	I	G	L	D	L	F	G	D	D	P	Q	.	.	.	.	.	.	.	F	E	R	Q	Q	W	L	L	D	E	Q	L	K	L	A	K	R	Y	D	L	P	V	I	L	H	S	R	R	T	H	D	K	L	A	M	H	L	K	R	H	D	L
Query Conservation																																	.	.	.	.	.	.	.
Alig confidence																																	.	.	.	.	.	.	.																															.
Template Conservation																																																																						.
Template Sequence		M	S	K	L	A	D	M	I	I	V	Y	V	K	A	Q	I	K	A	G	A	K	A	I	Q	I	F	D	S	W	V	G	A	L	N	Q	A	D	Y	R	T	Y	I	K	P	V	M	N	R	I	F	S	E	L	A	K	E	N	V	P	L	I	M	F	G	V	G	A	S	.	H	L	A	G	D	W	H	D	L	P	L
Template Known Secondary structure																				T		S							T	T	G	G	G	S									T													T	T		S							T	T		G	.	G	G						T	S	S
Template Predicted Secondary structure																																																																						.
Template SS confidence
		182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.		250	.	.	.	.	.	.	.	.	.	260
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.		.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.						.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
Predicted Secondary structure																								.																										.	.	.	.	.
Query SS confidence																								.																										.	.	.	.	.
Query Sequence		P	R	T	G	V	V	H	G	F	S	G	S	L	Q	Q	A	E	R	F	V	Q	L	.	G	Y	K	I	G	V	G	G	T	I	T	Y	P	R	A	S	K	T	R	D	V	I	A	K	L	.	.	.	.	.	P	L	A	S	L	L	L	E	T	D	A	P	D	M	P	L	N	G	F	Q	G	Q	P	N	R	P	E
Query Conservation																								.																										.	.	.	.	.
Alig confidence									.	.														.																										.	.	.	.	.																	.	.	.	.	.	.	.
Template Conservation									.	.																																																													.	.	.	.	.	.	.
Template Sequence		D	V	V	G	L	D	W	.	.	R	L	G	I	D	E	A	R	S	K	G	I	T	K	T	V	Q	G	N	L	D	P	S	I	L	L	A	P	W	E	V	I	E	Q	K	T	K	E	I	L	D	Q	G	M	E	S	D	G	F	I	F	N	L	G	H	G	V	F	P	D	.	.	.	.	.	.	.	V	S	P	E
Template Known Secondary structure		S						T	.	.	T	S								T	T			S						B		G	G	G	G	G	S																	T	T	S	S				B		B	S	S				T	T	.	.	.	.	.	.	.
Template Predicted Secondary structure									.	.																																																													.	.	.	.	.	.	.
Template SS confidence
		261	.	.	.	.	.	.			.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.								.	.	330	.
		225	.	.	.	.	230	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	A	A	R	V	F	A	V	L	C	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	L	K	K	L	T	A	F	V	H	E
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		332	.	.	.	.	.	.	.	340	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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