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Job DescriptionP39408
Confidence98.84%DateThu Jan 5 12:00:44 GMT 2012
Rank88Aligned Residues246
% Identity12%Templatec2icsA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:adenine deaminase; PDBTitle: crystal structure of an adenine deaminase
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   5....10.........20.........30.........40. ........50.........60.........70.........80
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Query Sequence  FIDTHCHFDFPPFSGDEEASLQRAAQAGVGKIIVPAT. . . . EAENFARVLALAENYQPLYAALGLHPGMLEKHSDVSLEQ
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Template Sequence  WIDDHVHCFEKX. ALYYDYPDEIGVKKGVTTVIDAGTTGAENIHEFYDLAQQAKTNVFGLVNISKWGIVAQDELADLSKV
Template Known Secondary structure 


TTS.SSS


TGGGTSSS
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   56...60....... ..70.........80.........90.........100.........110.........120.........130....
 
   81........90.........100.........110.........120.........130.........140.........150.........160
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Query Sequence  LQQALERRPAKVVAVGEIGLDLFGDDPQFERQQWLLDEQLKLAKRYDLPVILHSRRTHDKLAMHLKRHDLPRTGVVHGFS
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Template Conservation                                                                           .      
Template Sequence  QASLVKKAIQELPDFVVGIARXSRTVIGDNGITPLELAKQIQQENQEIPLXVHIGSAPPHLDEILALXEKGDV. LTHCFN
Template Known Secondary structure 

TTT

STT
TTTTTT



SSSS


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   135....140.........150.........160.........170.........180.........190.........200....... ..210...
 
   161.. ......170.........180.........190.........200.........210.........220........
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Query Sequence  GSL. . . . . . . . . . . . QQAERFVQLGYKIGVGGTITYPRASKTRDVIAKLPLASLLLETDAPDMPLNGFQGQPNRPEQAAR
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Template Sequence  GKENGILDQATDKIKDFAWQAYNKGVVFDIGHGTDSFNFHVAETALREGX. KAASISTDIYIRNRENGPVYD. . . . . LAT
Template Known Secondary structure 
STTSSTTTT
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   215....220.........230.........240.........250.........260.... .....270.........280..... ...
 
   229230.........240.........250.........
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Query Sequence  VFAVLCELRREPADEIAQALLNNTYTLFNVP
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Template Sequence  TXEKLRVV. GYDWPEIIEKVTKAPAENFHLT
Template Known Secondary structure  .T

TTTTT
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   289290...... ...300.........310........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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