Job Description P39408 Confidence 98.64% Date Thu Jan 5 12:00:44 GMT 2012 Rank 101 Aligned Residues 141 % Identity 13% Template c2i5gB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:amidohydrolase; PDBTitle: crystal strcuture of amidohydrolase from pseudomonas2 aeruginosa Resolution 2.60 Å

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		114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.										.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
Predicted Secondary structure																																																		.	.	.	.	.	.	.	.	.
Query SS confidence																																																		.	.	.	.	.	.	.	.	.
Query Sequence		W	L	L	D	E	Q	L	K	L	A	K	R	Y	D	L	P	V	I	L	H	S	R	R	T	H	D	K	L	A	M	H	L	K	R	H	D	L	P	R	T	G	V	V	H	G	F	S	G	.	.	.	.	.	.	.	.	.	S	L	Q	Q	A	E	R	F	V	Q	L	G	Y	K	I	G	V	G	G	T	I	T	Y
Query Conservation																																																		.	.	.	.	.	.	.	.	.
Alig confidence																					.	.																												.	.	.	.	.	.	.	.	.
Template Conservation																					.	.
Template Sequence		G	F	G	R	E	I	V	A	E	X	N	R	V	G	I	X	C	D	L	.	.	S	H	V	G	S	K	T	S	E	E	V	I	L	E	S	K	K	P	V	C	Y	S	H	C	L	P	S	G	L	K	E	H	P	R	N	K	S	D	E	E	L	K	F	I	A	D	H	G	G	F	V	G	V	T	X	F	A	P	F
Template Known Secondary structure															T						.	.	T	T	T		T	T										S	S									B	T	T	T	S			T	T	S	B											T	T									G	G	G
Template Predicted Secondary structure																					.	.
Template SS confidence
		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.			.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
		185	.	.											.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.																							.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence					.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	R	A	.	.	.	.	.	.	.	.	.	.	S	K	T	R	D	V	I	A	K	L	P	L	A	S	L	L	L	E	T	D	A	P	D	M	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	L	N	G	F	Q	G	Q	P	N	R	P	E	Q	A	A	R	V	F	A	V
Query Conservation					.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence					.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	K	K	G	I	D	S	T	I	D	D	Y	A	E	A	I	E	Y	V	X	N	I	V	G	E	D	A	I	G	I	G	T	D	F	T	Q	G	H	G	H	D	F	F	E	W	L	T	H	D	K	G	Y	A	R	R	L	T	N	F	G	K	I	V	N	P	L	G	I	R	T	V	G	E	F	P	N	L	T	E	T
Template Known Secondary structure		S	T	T	G	G	G		B																	T	T	S							B		T	T											B	G	G	G	T	S	S	B						S					B	T		S	S	G	G	G	T
Template Predicted Secondary structure
Template SS confidence
		218	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.
		233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	C	E	L	R	R	E	P	A	D	E	I	A	Q	A	L	L	N	N	T	Y	T	L	F	N
Query Conservation
Alig confidence					.
Template Conservation					.
Template Sequence		L	L	K	.	R	G	X	P	E	R	V	V	R	K	V	X	G	E	N	W	V	R	V	L	R
Template Known Secondary structure					.	T	T											T
Template Predicted Secondary structure					.
Template SS confidence
		298	.	300		.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions