Return to main results Retrieve Phyre Job Id

Job DescriptionP39408
Confidence23.96%DateThu Jan 5 12:00:44 GMT 2012
Rank208Aligned Residues195
% Identity14%Templatec1u22A_
PDB info PDB header:transferaseChain: A: PDB Molecule:5-methyltetrahydropteroyltriglutamate-- PDBTitle: a. thaliana cobalamine independent methionine synthase
Resolution2.65 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20 .........30.........40.........50.........60.........70..
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Query Sequence  ICRFIDTHCHFDFPPFSGD. . . . . . . . . EEASLQRAAQAGVGKIIVPATEAENFARVLALAENYQPLYAALGLHPGMLEK
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Template Sequence  XTKWFDTNYHYIVPELGPEVNFSYASHKAVNEYKEAKALGVDTVPVLVGPVSYLL. . . . . . . . . . . . . LSKAAKGVDKSF
Template Known Secondary structure 
TTSS



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   109110.........120.........130.........140.........150.........160... ......170.....
 
   73......80.........90.........100.........110.........120...... ...130.... .....140.....
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Query Sequence  HSDVSLEQLQQALERRPAKVVAVGEIGLDLFGDDPQFERQQWLLDEQLKLAKRY. . . . . DLPVILHS. . RRTHDKLAMHL
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Template Sequence  ELLSLLPKILPIYKEVITELKAAGATWIQLDEPVLVXDLEGQKLQAFTGAYAELESTLSGLNVLVETYFADIPAEAYKTL
Template Known Secondary structure 
GGGGT
S
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   176...180.........190.........200.........210.........220.........230.........240.........250.....
 
   146...150.........160.........170.........180....... ..190.........200.........
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Query Sequence  KRHDLPRTGVVHGFSGSLQQAERFVQLGYKIGVGGTITYPRA. . . . . . . . . . SKTRDVIAKLPLASLLLETDAP
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Template Sequence  TSLKGVTAFGFDLVRGTKTLDLVKAGFPEGKYLFAGVVDGRNIWANDFAASLSTLQALEGIVGKDKLVVSTSCS
Template Known Secondary structure  TT
SSTTT
TTT


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   256...260.........270.........280.........290.........300.........310.........320.........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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