Job Description P39408 Confidence 98.58% Date Thu Jan 5 12:00:44 GMT 2012 Rank 104 Aligned Residues 245 % Identity 12% Template c1r9yA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:cytosine deaminase; PDBTitle: bacterial cytosine deaminase d314a mutant. Resolution 1.57 Å

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		5	.	.	.	.	10	.	.																																.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.					40	.	.	.	.	.	.	.	.	.
Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.
Query SS confidence										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.
Query Sequence		F	I	D	T	H	C	H	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	F	P	P	F	S	G	D	E	E	A	S	L	Q	R	A	A	Q	A	G	V	G	K	I	I	V	P	.	.	.	.	A	T	E	A	E	N	F	A	R	V
Query Conservation										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.
Alig confidence										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.
Template Conservation
Template Sequence		F	V	E	P	H	I	H	L	D	T	T	Q	T	A	G	Q	P	N	W	N	Q	S	G	T	L	F	E	G	I	E	R	W	A	E	R	K	A	L	L	T	H	D	D	V	K	Q	R	A	W	Q	T	L	K	W	Q	I	A	N	G	I	Q	H	V	R	T	H	V	D	V	S	D	A	T	L	T	A	L	K	A	M
Template Known Secondary structure									T	T	T	T	T		T	T	S	S	S			S	S												T	T	G	G	G																				T	T												S	T	T
Template Predicted Secondary structure
Template SS confidence
		57	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
		50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.		.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																											.
Query SS confidence																																																											.
Query Sequence		L	A	L	A	E	N	Y	Q	P	L	Y	A	A	L	G	L	H	P	G	M	L	E	K	H	S	D	V	S	L	E	Q	L	Q	Q	A	L	E	R	R	P	A	K	V	V	A	V	G	E	I	G	L	D	L	F	G	D	D	.	P	Q	F	E	R	Q	Q	W	L	L	D	E	Q	L	K	L	A	K	R	Y	D	L
Query Conservation																																																											.
Alig confidence																																									.	.	.	.	.	.	.												.
Template Conservation																																									.	.	.	.	.	.	.
Template Sequence		L	E	V	K	Q	E	V	A	P	W	I	D	L	Q	I	V	A	F	P	Q	E	G	I	L	S	Y	P	N	G	E	A	L	L	E	E	A	L	R	L	.	.	.	.	.	.	.	G	A	D	V	V	G	A	I	P	H	F	E	F	T	R	E	Y	G	V	E	S	L	H	K	T	F	A	L	A	Q	K	Y	D	R
Template Known Secondary structure									T	T	T										T	T		S	S	S	S	T	T											T	.	.	.	.	.	.	.	T		S						G	G	G	S	S	S																			T
Template Predicted Secondary structure																																									.	.	.	.	.	.	.
Template SS confidence
		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.								.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.
		129	130	.	.	.	.	.	.	.								.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.									.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.													180	.
Predicted Secondary structure											.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence											.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	V	I	L	H	S	R	R	T	.	.	.	.	.	.	.	H	D	K	L	A	M	H	L	K	R	H	D	L	P	R	T	G	V	V	H	G	F	S	G	S	L	.	.	.	.	.	.	.	.	Q	Q	A	E	R	F	V	Q	L	G	Y	K	I	G	V	G	.	.	.	.	.	.	.	.	.	.	.	.	G	T
Query Conservation											.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence											.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	I	D	V	H	C	D	E	I	D	D	E	Q	S	R	F	V	E	T	V	A	A	L	A	H	H	E	G	M	G	A	R	V	T	A	S	H	T	T	A	M	H	S	Y	N	G	A	Y	T	S	R	L	F	R	L	L	K	M	S	G	I	N	F	V	A	N	P	L	V	N	I	H	L	Q	G	R	F	D	T	Y
Template Known Secondary structure										S	S		T	T															T		G	G	G							G	G	G	G	G	S																T														T	T	T	T			S
Template Predicted Secondary structure
Template SS confidence
		210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.
		182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	T	Y	P	R	A	S	K	T	R	D	V	I	A	K	L	P	L	A	S	L	L	L	E	T	D	A	P	D	M	P	L	N	G	F	Q	G	Q	P	N	R	P	E	Q	A	A	R	V	F	A	V	L	C	E	L	R	R	E	P	A	D	E	I	A	Q	A	L	L	N	N	T	Y	T	L	F	N	V	P
Query Conservation
Alig confidence																		.	.																	.
Template Conservation																		.	.																	.
Template Sequence		P	K	R	R	G	I	T	R	V	K	E	M	L	E	S	G	.	.	I	N	V	C	F	G	H	D	A	V	F	D	P	W	Y	P	.	L	G	T	A	N	M	L	Q	V	L	H	M	G	L	H	V	C	Q	L	M	G	Y	G	Q	I	N	D	G	L	N	L	I	T	H	H	S	A	R	T	L	N	L	Q
Template Known Secondary structure		S															T	.	.								B		S	S	B	T	T	B		.				S													T	T			S						G	G	G	G	G	G	T							T	T		S
Template Predicted Secondary structure																		.	.																	.
Template SS confidence
		290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.			.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.		.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions