Job Description P0CF07 Confidence 79.84% Date Thu Jan 5 11:30:39 GMT 2012 Rank 390 Aligned Residues 77 % Identity 13% Template d1l1oc_ SCOP info OB-fold Nucleic acid-binding proteins Single strand DNA-binding domain, SSB Resolution 2.80

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.												.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
Predicted Secondary structure																																								.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																								.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	I	S	C	P	S	C	S	A	T	D	G	V	V	R	N	G	K	S	T	A	G	H	Q	R	Y	L	C	S	H	C	R	K	T	W	Q	L	Q	.	.	.	.	.	.	.	.	.	.	.	F	T	Y	T	A	S	Q	P	G	T	H	Q	K	I	I	D	M	A	M	N	G	V	G	C	R	A	T	A	R	I	M
Query Conservation																																								.	.	.	.	.	.	.	.	.	.	.
Alig confidence															.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.																				.
Template Conservation															.	.	.	.	.																																																			.
Template Sequence		Y	Q	A	C	P	T	Q	D	C	N	K	K	V	.	.	.	.	.	I	D	Q	Q	N	G	L	Y	R	C	E	K	C	D	T	E	F	P	N	F	K	Y	R	M	I	L	S	V	N	I	A	D	F	Q	E	N	Q	W	V	T	C	F	Q	E	S	A	E	A	I	L	.	G	Q	N	A	A	Y	L	G	E	L	K
Template Known Secondary structure				B			S	T	T				B		.	.	.	.	.				T	T	T					T	T	T	T				S	S														S	S																	.	S	S									T
Template Predicted Secondary structure															.	.	.	.	.																																																			.
Template SS confidence
		478	.	480	.	.	.	.	.	.	.	.	.	490						.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540		.	.	.	.	.	.	.	.	.	550	.
		74	.	.	.	.	.	80	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	V	G	L	N	T	I	L	R	H	L	K	N	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	K	N	E	Q	A	F	E	E	V	F	Q	N	A
Template Known Secondary structure		T	S												T
Template Predicted Secondary structure
Template SS confidence
		552	.	.	.	.	.	.	.	560	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions