 |
Job Description | P0CF07 | Confidence | 92.94% | Date | Thu Jan 5 11:30:39 GMT 2012 |
Rank | 83 | Aligned Residues | 36 |
% Identity | 14% | Template | d1j5ya1 |
SCOP info | DNA/RNA-binding 3-helical bundle
| "Winged helix" DNA-binding domain
| Biotin repressor-like
|
Resolution | 2.30 |
|
  |   |
54 | . | . | . | . | . | 60 | . | . | |
|
|
. | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
| . | . | . |
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Q | K | I | I | D | M | A | M | N | . |
. |
. |
G | V | G | C | R | A | T | A | R | I | M | G | V | G | L | N | T | I | L | R | H | L | K | N | S | G | R |
Query Conservation |   |
  |   |   |   |   |
|   |   |   | . | . | . |   |   |
|   |
|   |
|
|
|   |
|
|
|
|   |   |
|
|   |
|   |
|   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|
|   |   |
|   |   |   |   |   |   |
|
|   |   |
|
|
|   |   |
|   |
|
|   |
|
|
|   |
|
|
|   |   |
|   |   |
Template Sequence |   |
K | S | I | V | R | I | L | E | R | S | K | E | P | V | S | G | A | Q | L | A | E | E | L | S | V | S | R | Q | V | I | V | Q | D | I | A | Y | L | R | S |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |
| S | S |
| B |
|  |  |  |  |  |  |  |  | T | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
12 | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|