Job Description P0CF07 Confidence 88.29% Date Thu Jan 5 11:30:39 GMT 2012 Rank 177 Aligned Residues 27 % Identity 33% Template c1s1i9_ PDB info PDB header:ribosome Chain: 9: PDB Molecule:60s ribosomal protein l43; PDBTitle: structure of the ribosomal 80s-eef2-sordarin complex from2 yeast obtained by docking atomic models for rna and protein3 components into a 11.7 a cryo-em map. this file, 1s1i,4 contains 60s subunit. the 40s ribosomal subunit is in file5 1s1h. Resolution 11.70 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	C	P	S	C	S	A	T	D	G	V	V	R	N	G	K	S	T	A	G	H	Q	R	Y	L	C	S	H	C	R	K	T	W
Query Conservation
Alig confidence									.				.	.	.	.	.
Template Conservation									.				.	.	.	.	.
Template Sequence		D	C	S	F	C	G	K	.	K	T	V	.	.	.	.	.	K	R	G	A	A	G	I	W	T	C	S	C	C	K	K	T	V
Template Known Secondary structure				T	T	T		S	.	S			.	.	.	.	.				T	T	T					S	S	S
Template Predicted Secondary structure									.				.	.	.	.	.
Template SS confidence
		37	.	.	40	.	.	.		.	.	.						.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions