 |
Job Description | P31572 | Confidence | 91.84% | Date | Thu Jan 5 11:48:19 GMT 2012 |
Rank | 37 | Aligned Residues | 93 |
% Identity | 19% | Template | c3oneA_ |
PDB info |
PDB header:hydrolase/hydrolase substrate | Chain: A: PDB Molecule:adenosylhomocysteinase; |
PDBTitle: crystal structure of lupinus luteus s-adenosyl-l-homocysteine2 hydrolase in complex with adenine
|
Resolution | 1.35 Å |
|
 |
  |   |
12 | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . |
Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | A | G | L | R | V | V | F | S | G | I | E | I | A | G | P | F | A | G | Q | M | F | A | E | W | G | A | E | V | I | W | I | E | N | V | A | W | A | D | T | I | R | V | Q | P | N | Y | P | Q | L | S | R | R | N | L | H | A | L | S | L | N | I | F | K | D | E | G | R | E | A | F | L | K | L | M | E | T | T | D | I |
Query Conservation |   |
|   |
|
|
|
|
|
|
|   |   |   |   |
|
|
|   |
|
|   |   |
|
|
|   |
|
|
|
|
|
|
|
|   |
|   |   |
|
|   |   |
|   |   |   |   |   |   |   |   |   |
|
|
|
|   |
|
|   |
|
|
|   |   |   |   |
|
|   |   |
|   |   |
|
|   |   |
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|
|   |
|
|
|
|
|
|
|   |
|
|   |
|
|
|   |   |
|   |
|   |
|   |   |
|   |
|   |
|   |
|
| . | . | . | . | . | . | . |   |   |   |   |   |
|   |   | . |
|
|   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . |
|   |
|   |
|   |   |
|
|
|
Template Sequence |   |
I | A | G | K | V | A | V | V | A | G | Y | G | D | V | G | K | G | C | A | A | A | L | K | Q | A | G | A | R | V | I | V | T | E | I | D | P | . |
. |
. |
. |
. |
. |
. |
I | C | A | L | Q | A | T | M | . |
E | G | L | Q | V | L | T | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
L | E | D | V | V | S | E | A | D | I |
Template Known Secondary structure |   |
| T | T |
|  |  |  |  |  |
|
| S |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |
| S |
|  | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  | . | T | T |
|  |  |
|
| . | . | . | . | . | . | . | . | . | . | . |  |  |  |  | T | T | T |
| S |  |
Template Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
| . | . | . | . | . | . | . |
|  |  |  |  |  |  |  | . |
|
|  |  |  |
|
| . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |
|
|
|  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | |
|
|
|
|
|
|
. | . | . | . | 300 | . | . | . | |
. | . | . | . | . | . | 310 | |
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | . | 320 |
  |
  |   |
92 | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
F | I | E | A | S | K | G | P | A | F | A | R | R | G | I | T | D | E | V | L | W | Q | H | N | P | K | L | V | I | A | H | L | S | G | F | G |
Query Conservation |   |
|
|
|
|   |
|
|
|   |
|   |
|
|
|
|   |   |   |   |
|   |   |   |
|
|   |
|
|   |   |
|
|
|
|
|
|
Alig confidence |   |
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|
|
| . | . | . | . |   |   |   |
|
|   |   |   |   |
|   |   |
|
|   |
|
|
|
|   |
|   |
|   |   |   |
Template Sequence |   |
F | V | T | T | T | G | . |
. |
. |
. |
N | K | D | I | I | M | L | D | H | M | K | K | M | K | N | N | A | I | V | C | N | I | G | H | F | D |
Template Known Secondary structure |   |
 |  |  |
| S | S | . | . | . | . |
| S |
| S | B |
|  |  |  |  | T | T | S |
| T | T |  |  |  |  |  |
| S | S | S | G |
Template Predicted Secondary structure |   |
 |  |  |
|
|
| . | . | . | . |
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
321 | . | . | . | . | . | |
|
|
|
. | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|