Return to main results Retrieve Phyre Job Id

Job DescriptionP31572
Confidence93.30%DateThu Jan 5 11:48:19 GMT 2012
Rank19Aligned Residues90
% Identity19%Templatec3gvxA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:glycerate dehydrogenase related protein; PDBTitle: crystal structure of glycerate dehydrogenase related2 protein from thermoplasma acidophilum
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   12.......20.........30.........40.........50.........60.........70.........80.........90.
Predicted Secondary structure 





























Query SS confidence 















































































Query Sequence  LAGLRVVFSGIEIAGPFAGQMFAEWGAEVIWIENVAWADTIRVQPNYPQLSRRNLHALSLNIFKDEGREAFLKLMETTDI
Query Conservation 
 






    


 

  


 







 
  

  
         



 

 


    

  
  

  


Alig confidence 














































.......................









Template Conservation 
 







 
 

  

  
  

  
    
             .......................
 


  


Template Sequence  LYGKALGILGYGGIGRRVAHLAKAFGXRVIAYTRSSVDQNVDVISES. . . . . . . . . . . . . . . . . . . . . . . PADLFRQSDF
Template Known Secondary structure 
TT


ST

SS


TT
S
SS.......................
S
Template Predicted Secondary structure 




















.......................


Template SS confidence 















































































   120.........130.........140.........150.........160...... ...170......
 
   92.......100.........110.........120....
Predicted Secondary structure 









Query SS confidence 
































Query Sequence  FIEASKGPAFARRGITDEVLWQHNPKLVIAHLS
Query Conservation 



 


 
 



    
   

 

  


Alig confidence 
































Template Conservation 
    


  
  

    
  

 

 


 
Template Sequence  VLIAIPLTDKTRGXVNSRLLANARKNLTIVNVA
Template Known Secondary structure 




TTTTT
BSTT

TT

S
Template Predicted Secondary structure 














Template SS confidence 
































   177..180.........190.........200.........
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions