Job Description P31572 Confidence 100.00% Date Thu Jan 5 11:48:19 GMT 2012 Rank 2 Aligned Residues 400 % Identity 96% Template c1xa3B_ PDB info PDB header:transferase Chain: B: PDB Molecule:crotonobetainyl-coa:carnitine coa-transferase; PDBTitle: crystal structure of caib, a type iii coa transferase in2 carnitine metabolism Resolution 1.85 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	P	M	P	K	F	G	P	L	A	G	L	R	V	V	F	S	G	I	E	I	A	G	P	F	A	G	Q	M	F	A	E	W	G	A	E	V	I	W	I	E	N	V	A	W	A	D	T	I	R	V	Q	P	N	Y	P	Q	L	S	R	R	N	L	H	A	L	S	L	N	I	F	K	D	E	G	R	E	A	F	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	P	X	P	K	F	G	P	L	A	G	L	R	V	V	F	S	G	I	E	I	A	G	P	F	A	G	Q	X	F	A	E	W	G	A	E	V	I	W	I	E	N	V	A	W	A	D	T	I	R	V	Q	P	N	Y	P	Q	L	S	R	R	N	L	H	A	L	S	L	N	I	F	K	D	E	G	R	E	A	F	L
Template Known Secondary structure								S	T	T	T	T									S	S												T	T									S	S	S			G	G	G	G	S	S	S						T	T	T								T	T	S
Template Predicted Secondary structure
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	L	M	E	T	T	D	I	F	I	E	A	S	K	G	P	A	F	A	R	R	G	I	T	D	E	V	L	W	Q	H	N	P	K	L	V	I	A	H	L	S	G	F	G	Q	Y	G	T	E	E	Y	T	N	L	P	A	Y	N	T	I	A	Q	A	F	S	G	Y	L	I	Q	N	G	D	V	D	Q	P	M	P	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	L	X	E	T	T	D	I	F	I	E	A	S	K	G	P	A	F	A	R	R	G	I	T	D	E	V	L	W	Q	H	N	P	K	L	V	I	A	H	L	S	G	F	G	Q	Y	G	T	E	E	Y	T	N	L	P	A	Y	N	T	I	A	Q	A	F	S	G	Y	L	I	Q	N	G	D	V	D	Q	P	X	P	A
Template Known Secondary structure					T	T		S							S	S	S					T	T											T	T								S	S		S	S	S		T	T	T	T	T	S											T	T	S	G	G	G	S			T	T
Template Predicted Secondary structure
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	P	Y	T	A	D	Y	F	S	G	L	T	A	T	T	A	A	L	A	A	L	H	K	V	R	E	T	G	K	G	E	S	I	D	I	A	M	Y	E	V	M	L	R	M	G	Q	Y	F	M	M	D	Y	F	N	G	G	E	M	C	P	R	M	S	K	G	K	D	P	Y	Y	A	G	C	G	L	Y	K	C	A	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	P	Y	T	A	D	Y	F	S	G	L	T	A	T	T	A	A	L	A	A	L	H	K	V	R	E	T	G	K	G	E	S	I	D	I	A	X	Y	E	V	X	L	R	X	G	Q	Y	F	X	X	D	Y	F	N	G	G	E	X	C	P	R	X	S	K	G	K	D	P	Y	Y	A	G	C	G	L	Y	K	C	A	D
Template Known Secondary structure		T	T	T																																										T									T	T	S						B	B	T	T	B		S	S	B	T	T							T	T
Template Predicted Secondary structure
Template SS confidence
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	Y	I	V	M	E	L	V	G	I	T	Q	I	E	E	C	F	K	D	I	G	L	A	H	L	L	G	T	P	E	I	P	E	G	T	Q	L	I	H	R	I	E	C	P	Y	G	P	L	V	E	E	K	L	D	A	W	L	A	T	H	T	I	A	E	V	K	E	R	F	A	E	L	N	I	A	C	A	K	V	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	Y	I	V	X	E	L	V	G	I	T	Q	I	E	E	C	F	K	D	I	G	L	A	H	L	L	G	T	P	E	I	P	E	G	T	Q	L	I	H	R	I	E	C	P	Y	G	P	L	V	E	E	K	L	D	A	W	L	A	T	H	T	I	A	E	V	K	E	R	F	A	E	L	N	I	A	C	A	K	V	L
Template Known Secondary structure										S												T		G	G	G	T	T	B	T	T	B		T	T			S		B	T	T	T	S	T	T														T	S													T
Template Predicted Secondary structure
Template SS confidence
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.
		324	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	V	P	E	L	E	S	N	P	Q	Y	V	A	R	E	S	I	T	Q	W	Q	T	M	D	G	R	T	C	K	G	P	N	I	M	P	K	F	K	N	N	P	G	Q	I	W	R	G	M	P	S	H	G	M	D	T	A	A	I	L	K	N	I	G	Y	S	E	N	D	I	Q	E	L	V	S	K	G	L	A	K	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	V	P	E	L	E	S	N	P	Q	Y	V	A	R	E	S	I	T	Q	W	Q	T	X	D	G	R	T	C	K	G	P	N	I	X	P	K	F	K	N	N	P	G	Q	I	W	R	G	X	P	S	H	G	X	D	T	A	A	I	L	K	N	I	G	Y	S	E	N	D	I	Q	E	L	V	S	K	G	L	A	K	V
Template Known Secondary structure			G	G	G	S	T	T								T								T	T	S									S	S			S	S	S											T	T	T	T								T	T													T	S
Template Predicted Secondary structure
Template SS confidence
		324	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions