Job Description P0AF24 Confidence 98.30% Date Thu Jan 5 11:24:57 GMT 2012 Rank 128 Aligned Residues 203 % Identity 11% Template d2vkqa1 SCOP info HAD-like HAD-like Pyrimidine 5'-nucleotidase (UMPH-1) Resolution 2.5

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		5	.	.	.	.	10	.	.	.	.																	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.
Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		N	V	I	C	D	I	D	G	V	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	M	H	D	N	V	A	V	P	G	A	A	E	F	L	H	G	I	M	D	K	G	L	P	L	V	L	L	T	N	Y	P	S	Q	T	G	Q	D	L	A	N	R	F	A	T	A	G	V	D	V	P	D	S	V	F
Query Conservation												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	I	I	T	D	F	D	M	T	L	S	R	F	S	Y	K	G	K	R	C	P	T	C	H	N	I	I	D	N	C	K	L	V	T	D	E	C	R	K	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	L	Q	L	K	E	K	Y	Y	A	I	E	V	D	P	V	L	T	V	E
Template Known Secondary structure								T	T	T	T	B		S			T	T												T	S	T	T	S								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													T		S	S	S
Template Predicted Secondary structure																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		34	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.																					.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	T	S	A	M	A	T	A	D	F	L	R	R	Q	E	G	K	K	A	Y	V	V	G	E	G	A	L	I	H	E	L	Y	K	A	G	F	T	I	T	D	V	N	P	D	F	V	I	V	G	E	T	R	S	Y	N	W	D	M	M	H	K	A	A	Y	F	V	A	N	G	A	R	F	I	A	T	N	P	D	T	H
Query Conservation
Alig confidence																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	K	Y	P	Y	M	V	E	W	Y	T	K	S	H	G	L	L	V	Q	Q	A	L	P	K	A	K	L	K	E	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	A	E	S	D	V	M	L	K	E	G	Y	E	N	F	F	D	K	L	Q	Q	H	S	I	P	V	F	I	F	S	A	G	I	G	D
Template Known Secondary structure																						T		B	G	G	G					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			T	S				B		B	T											T	T
Template Predicted Secondary structure																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.																.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.															.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.			.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.
Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.
Query SS confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.
Query Sequence		G	R	G	F	Y	P	A	C	G	A	L	C	A	G	I	E	K	I	S	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	K	P	F	Y	V	G	K	P	S	P	W	I	I	R	A	A	L	N	K	M	Q	A	.	.	H	S	E	E	T	V	I	V	G	D	N	L	R	T	D	I	L	A	G	F	Q
Query Conservation																						.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.													.
Template Conservation																																																																									.
Template Sequence		V	L	E	E	V	I	R	Q	A	G	V	Y	H	P	N	V	K	V	V	S	N	F	M	D	F	D	E	T	G	V	L	K	G	F	K	G	E	L	I	H	V	F	N	K	H	D	G	A	L	R	N	T	E	Y	F	N	Q	L	K	D	N	S	N	I	I	L	L	G	D	S	Q	.	G	D	L	R	M	A	D	G
Template Known Secondary structure										T	T				T	T												T	T	S	B						S	S				T	T									T						T	T	T	T									S	S	S	.	G	G	G	G	T	T	T	T
Template Predicted Secondary structure																																																																									.
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.		230	.	.	.	.	.	.	.
		213	.	.	.	.	.	.	220	.	.	.	.				.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
Predicted Secondary structure														.	.	.
Query SS confidence														.	.	.
Query Sequence		A	G	L	E	T	I	L	V	L	S	G	V	.	.	.	S	S	L	D	D	I	D	S	M	P	F	R	P	S	W	I	Y	P	S
Query Conservation														.	.	.
Alig confidence														.	.	.
Template Conservation
Template Sequence		V	A	N	V	E	H	I	L	K	I	G	Y	L	N	D	R	V	D	E	L	L	E	K	Y	M	D	S	Y	D	I	V	L	V	Q
Template Known Secondary structure			S			S										S	S										T	T	S	S					T
Template Predicted Secondary structure
Template SS confidence
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions