Return to main results Retrieve Phyre Job Id

Job DescriptionP0AF24
Confidence99.63%DateThu Jan 5 11:24:57 GMT 2012
Rank89Aligned Residues232
% Identity15%Templated2rbka1
SCOP infoHAD-like HAD-like Predicted hydrolases Cof
Resolution1.00

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10.........20. ........30.........40.........50.........60.........70.........80.
Predicted Secondary structure 










..

















Query SS confidence 

















. .



























































Query Sequence  KNVICDIDGVLMHDNVAV. . PGAAEFLHGIMDKGLPLVLLTNYPSQTGQDLANRFATAGVDVPDSVFYTSAMATADFLRR
Query Conservation 
 



 



 
     ..      
      
      
                                       
Alig confidence 

















..










































...













Template Conservation 


  






      
       
  
   

 
   


                    ...    
         
Template Sequence  KALFFDIDGTLVSFETHRIPSSTIEALEAAHAKGLKIFIATGRPKAIINNLSELQDRNLIDGY. . . ITMNGAYCFVGEEV
Template Known Secondary structure 

SBTTTB
TTTSS

TT

SS
GGG

S
TT


...GGGTTT
Template Predicted Secondary structure 


























...




Template SS confidence 















































































   3......10.........20.........30.........40.........50.........60..... ....70.........
 
   82.......90.........100....... ..110.........120.........130.........140.........
Predicted Secondary structure 









............















Query SS confidence 

























. . . . . . . . . . . .









































Query Sequence  QEGKKAYVVGEGALIHELYKAGFTIT. . . . . . . . . . . . DVNPDFVIVGETRSYNWDMMHKAAYFVANGARFIATNPDTHG
Query Conservation                            ............                                          
Alig confidence 

























............









































Template Conservation       
       
                                                                  
Template Sequence  IYKSAIPQEEVKAMAAFCEKKGVPCIFVEEHNISVCQPNEMVKKIFYDFLHVNVIPTVSFEEASNKEVIQMTPFITEEEE
Template Known Secondary structure 



T


SS
S

TTTTT





B

TS

S


Template Predicted Secondary structure 





























Template SS confidence 















































































   80.........90.........100.........110.........120.........130.........140.........150.........
 
   150.........160.........170.........180.........190.........200.........210.........220.........
Predicted Secondary structure 































Query SS confidence 















































































Query Sequence  RGFYPACGALCAGIEKISGRKPFYVGKPSPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILVLSGVSSLDD
Query Conservation           
   
            

                     


    

  
  

   
 
  
      
Alig confidence 




















































.











.......






Template Conservation                      

      
   
  
          
  


 . 

  

  
  ....... 


 

Template Sequence  KEVLPSIPTCEIGRWYPAFADVTAKGDTKQKGIDEIIRHFGIKLEETMSFGDG. GNDISMLRHAAI. . . . . . . GVAMGQA
Template Known Secondary structure  GGGSTT

SSTT

STT
ST

GGG
S.GGGSS.......
TTS
Template Predicted Secondary structure 



















.



.......



Template SS confidence 















































































   160.........170.........180.........190.........200.........210.. .......220.... .....230.
 
   230.........240......
Predicted Secondary structure 







Query SS confidence 
















Query Sequence  IDSMPFRPSWIYPSVAE
Query Conservation         

 

 

 
Alig confidence 
















Template Conservation         
  
      
Template Sequence  KEDVKAAADYVTAPIDE
Template Known Secondary structure 
SS


GGG
Template Predicted Secondary structure 







Template SS confidence 
















   232.......240........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions