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Job DescriptionP0AF24
Confidence98.54%DateThu Jan 5 11:24:57 GMT 2012
Rank124Aligned Residues127
% Identity25%Templated1ltqa1
SCOP infoHAD-like HAD-like phosphatase domain of polynucleotide kinase
Resolution2.33

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10........ .20.........30.........40.........50.........60.........70
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Query Sequence  KNVICDIDGVLMHDN. . . . . . . . . . . . . VAVPGAAEFLHGIMDKGLPLVLLTNYPSQTGQDLANRFATAGVDVPDSVFYT
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Template Sequence  KAVIFDVDGTLAKXNGRGPYDLEKCDTDVINPXVVELSKXYALXGYQIVVVSGRESGTKED. . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  TBTTTB

SS

TT
GGGGGG

B
TT

S



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   160.........170.........180.........190.........200.........210.........220
 
   71........80.........90.........100.........110.........120.........130.........140.........150
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Query Sequence  SAMATADFLRRQEGKKAYVVGEGALIHELYKAGFTITDVNPDFVIVGETRSYNWDMMHKAAYFVANGARFIATNPDTHGR
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . PTKYYR
Template Known Secondary structure  ..........................................................................TT
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   221.....
 
   151........160.........170.........180.........190.........200.........210.........220...
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Query Sequence  GFYPACGALCAGIEKISGRKPFYVGKPSPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILVLSG
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Template Sequence  XTRKWVEDIAGVPLVXQCQREQGDTRKDDVVKEEIFWKHIAPHFDVKLAIDDRTQVVEXWRRIGVECWQVASG
Template Known Secondary structure  TT



S

TT

S
TTTT


TT


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   227..230.........240.........250.........260.........270.........280.........290.........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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