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Job DescriptionP0AF24
Confidence99.94%DateThu Jan 5 11:24:57 GMT 2012
Rank25Aligned Residues205
% Identity19%Templatec3s6jC_
PDB info PDB header:hydrolaseChain: C: PDB Molecule:hydrolase, haloacid dehalogenase-like family; PDBTitle: the crystal structure of a hydrolase from pseudomonas syringae
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10.........20.........30.........40.........50.........60.........70.........80...
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Query Sequence  KNVICDIDGVLMHDNVAVPGAAEFLHGIMDKGLPLVLLTNYPSQTGQDLANRFATAGVDVPDSVFYTSAMATADFLRRQE
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Template Sequence  TSFIFDLDGTLTDSVYQNVAAWKEA. . LDAENIPL. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . AXWRIHRKIGXSG
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BTTT
..TT


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TTTTS
T
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   108.110.........120.........130.. .......140 .........150...
 
   84.....90.........100.........110.........120.........130.........140.........150.........160...
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Query Sequence  GKKAYVVGEGALIHELYKAGFTITDVNPDFVIVGETRSYNWDMMHKAAYFVANGARFIATNPDTHGRGFYPACGALCAGI
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Template Sequence  GLXTGXSITDEQAERLSEKHAQAYERLQHQI. . . . . IALPGAVELLETLDKENLKWCIATSGGIDTATINLKALKLDINK
Template Known Secondary structure  TT






TTGGG
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TTTT


SS
TT

GGG
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   154.....160.........170.........180.... .....190.........200.........210.........220........
 
   164.....170.........180.........190.........200.........210.........220.........230.........240...
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Query Sequence  EKISGRKPFYVGKPSPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILVLSGVSSLDDIDSMPFRPSWIYPS
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Template Sequence  INIVTRDDVSYGKPDPDLFLAAAKKIGAPIDECLVIGDAI. WDXLAARRCKATGVGLLSGGYDIGELERAG. . ALRVYED
Template Known Secondary structure  S

GGGSSS
TTSSTT

GGGSS.TT
GGGS

TT..
SSS
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   236...240.........250.........260.........270..... ....280.........290.........300..... ....310..
 
   244.....250
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Query Sequence  VAEIDVI
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Template Sequence  PLDLLNH
Template Known Secondary structure  TT
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   313......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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