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Job DescriptionP0AF24
Confidence99.89%DateThu Jan 5 11:24:57 GMT 2012
Rank56Aligned Residues189
% Identity20%Templatec3m9lA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:hydrolase, haloacid dehalogenase-like family; PDBTitle: crystal structure of probable had family hydrolase from2 pseudomonas fluorescens pf-5
Resolution1.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.........80.
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Query Sequence  TIKNVICDIDGVLMHDNVAVPGAAEFLHGIMDKGLPLVLLTNYPSQTGQDLANRFATAGVDVPDSVFYTSAMATADFLRR
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Template Sequence  EIKHWVFDXDGTLTIAVHDFAAI. . . . . . REALSIPA. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  G


TBTTT
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   5....10.........20....... ..30.....
 
   82.......90.........100.........110.........120.........130.........140.........150.........160.
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Query Sequence  QEGKKAYVVGEGALIHELYKAGFTITDVNPDFVIVGETRSYNWDMMHKAAYFVANGARFIATNPDTHGRGFYPACGALCA
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Template Sequence  . . . . EDDILTHLAALPADESAAKHAWLLEHERDLAQGSRPAPGAVELVRELAGRGYRLGILTRNARELAHVTLEAIGLAD
Template Known Secondary structure  ....TS
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GG
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   36...40.........50.........60.........70.........80.........90.........100.........110.
 
   162 .......170.........180.........190.........200.........210.........220.........230.........240
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Query Sequence  G. IEKISGRKPFYVGKPSPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILVLSGVSSLDDIDSMPFRPSWI
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Template Sequence  CFAEADVLGRDEAPPKPHPGGLLKLAEAWDVSPSRXVXVGDYR. FDLDCGRAAGTRTVLVNLPDNPWPEL. . . . . . TDWH
Template Known Secondary structure  GS
GGG
TTTS

TTSSTT

GGGSS.T

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S
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   112.......120.........130.........140.........150.... .....160.........170.........180 ....
 
   241........250
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Query Sequence  YPSVAEIDVI
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Template Sequence  ARDCAQLRDL
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SS
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   185....190....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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