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Job DescriptionP0AF24
Confidence99.41%DateThu Jan 5 11:24:57 GMT 2012
Rank108Aligned Residues139
% Identity22%Templatec3e8mD_
PDB info PDB header:transferaseChain: D: PDB Molecule:acylneuraminate cytidylyltransferase; PDBTitle: structure-function analysis of 2-keto-3-deoxy-d-glycero-d-galacto-2 nononate-9-phosphate (kdn) phosphatase defines a new clad within the3 type c0 had subfamily
Resolution1.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.........80.
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Query Sequence  TIKNVICDIDGVLMHDNVAVPGAAEFLHGIMDKGLPLVLLTNYPSQTGQDLANRFATAGVDVPDSVFYTSAMATADFLRR
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Template Sequence  EIKLILTDIDGVWTDG. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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   3......10........
 
   82.......90.........100.........110.........120.........130.........140.........150.........160.
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Query Sequence  QEGKKAYVVGEGALIHELYKAGFTITDVNPDFVIVGETRSYNWDMMHKAAYFVANGARFIATNPDTHGRGFYPACGALCA
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . GMFYDQTGNEWKKFNTSDSAGIFWAHNKGIPVGILTGEKTEIVRRRAEKLKVDY
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   1920.........30.........40.........50.........60.........70..
 
   162.......170.........180.........190.........200.........210.........220.........230.........240.
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Query Sequence  GIEKISGRKPFYVGKPSPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILVLSGVSSLDDIDSMPFRPSWIY
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Template Sequence  LF. . . . . . . . . QGVVDKLSAAEELCNELGINLEQVAYIGDDL. NDAKLLKRVGI. . . . . . . AGVPASAPFYIRRLSTIFL
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   73. .....80.........90.........100..... ....110...... ...120.........130.....
 
   242. ....
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Query Sequence  PS. . . . . . VAEI
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Template Sequence  EKRGGEGVFREF
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   136...140.......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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