Return to main results Retrieve Phyre Job Id

Job DescriptionP0AF24
Confidence91.87%DateThu Jan 5 11:24:57 GMT 2012
Rank148Aligned Residues118
% Identity14%Templatec3b8eC_
PDB info PDB header:hydrolase/transport proteinChain: C: PDB Molecule:sodium/potassium-transporting atpase subunit PDBTitle: crystal structure of the sodium-potassium pump
Resolution3.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   119120.........130.........140.........150.........
Predicted Secondary structure 















.......................................
Query SS confidence 








































. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Query Sequence  TRSYNWDMMHKAAYFVANGARFIATNPDTHGRGFYPACGAL. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Query Conservation                                          
.......................................
Alig confidence 








































.......................................
Template Conservation 
 

      
  
  


 
 




   

  

   

                              

 
  
  
Template Sequence  DPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETVEDIAARLNIPVSQVNPRDAKACVVHGSDLKD
Template Known Secondary structure 

B
SSTT

SS
TSS

S
BTTSSSSSSTTTTTTTT

SB
TT
Template Predicted Secondary structure 












































Template SS confidence 















































































   586...590.........600.........610.........620.........630.........640.........650.........660.....
 
   160.........170.........180.........190.........200.........210.........220.........230......
Predicted Secondary structure  ...
































Query SS confidence  . . .












































































Query Sequence  . . . CAGIEKISGRKPFYVGKPSPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILVLSGVSSLDDIDSMPFR
Query Conservation  ...   
            

                     


    

  
  

   
 
  
             
Alig confidence  ...











































.










...














...
Template Conservation 
               



 

  
  

  

  
  
 




 .

  


 


...


 
  

  
  
...
Template Sequence  MTSEQLDDILKYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGV. NDSPASKKADI. . . GVAMGIAGSDVSKQA. . .
Template Known Secondary structure 

TSS


S

TTT



SG.GGTTSS...

TTSS
TT...
Template Predicted Secondary structure 












.




...



...
Template SS confidence 















































































   666...670.........680.........690.........700.........710.. .......720... ......730........
 
   237..240...
Predicted Secondary structure 



Query SS confidence 






Query Sequence  PSWIYPS
Query Conservation 

 

 
Alig confidence 






Template Conservation 




  
Template Sequence  ADMILLD
Template Known Secondary structure 
S
SS
Template Predicted Secondary structure 






Template SS confidence 






   739740.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions