Job Description P0AF24 Confidence 98.73% Date Thu Jan 5 11:24:57 GMT 2012 Rank 122 Aligned Residues 178 % Identity 14% Template c2i7dB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:5'(3')-deoxyribonucleotidase, cytosolic type; PDBTitle: structure of human cytosolic deoxyribonucleotidase in2 complex with deoxyuridine, alf4 and mg2+ Resolution 1.20 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	I	C	D	I	D	G	V	L	M	H	D	N	V	A	V	P	G	A	A	E	F	L	H	G	I	M	D	K	G	L	P	L	V	L	L	T	N	Y	P	S	Q	T	G	Q	D	L	A	N	R	F	A	T	A	G	V	D	V	P	D	S	V	F	Y	T	S	A	M	A	T	A	D	F	L	R	R	Q	E	G	K
Query Conservation
Alig confidence																						.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																						.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	L	V	D	M	D	G	V	L	A	D	F	E	A	G	L	L	R	G	F	.	.	.	.	.	R	R	R	F	P	E	E	P	H	V	P	L	E	Q	R	R	G	F	L	A	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure						S	B	T	T	T	B											.	.	.	.	.				S	T	T	S					G	G	G			S	S				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																						.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.						.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.		.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.		.	160	.	.	.
Predicted Secondary structure																																																			.																									.
Query SS confidence																																																			.																									.
Query Sequence		K	A	Y	V	V	G	E	G	A	L	I	H	E	L	Y	K	A	G	F	T	I	T	D	V	N	P	D	F	V	I	V	G	E	T	R	S	Y	N	W	D	M	M	H	K	A	A	Y	F	V	.	A	N	G	A	R	F	I	A	T	N	P	D	T	H	G	R	G	F	Y	P	A	C	G	A	.	L	C	A	G	I
Query Conservation																																																			.																									.
Alig confidence		.	.	.	.	.	.	.																																											.																									.
Template Conservation		.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	E	Q	Y	R	A	L	R	P	D	L	A	D	K	V	A	S	V	Y	E	A	P	G	F	F	L	D	L	E	P	I	P	G	A	L	D	A	V	R	E	M	N	D	L	P	D	T	Q	V	F	I	C	T	S	P	L	L	K	Y	H	H	C	V	G	E	K	Y	R	W	V	E	Q	H	L
Template Known Secondary structure		.	.	.	.	.	.	.								T	T										T	S	T	T	T	T	T	T			B		T	T											S	T	T											S	S		T	T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.
Template SS confidence
									48	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	K	I	S	G	R	K	P	F	Y	V	G	K	P	S	P	W	I	I	R	A	A	L	N	K	M	Q	A	H	S	E	E	T	V	I	V	G	D	N	L	R	T	D	I	L	A	G	F	Q	A	G	L	E	T	I	L	V	L	S	G	V	S	S	L	D	D	I	D	S	M	P	F	R	P	S	W	I	Y	P	S
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.																					.	.								.																													.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.																					.	.								.																													.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	G	P	Q	F	V	E	R	I	I	L	T	R	D	K	T	V	V	L	G	D	.	.	L	L	I	D	D	K	D	.	T	V	R	G	Q	E	E	T	P	S	W	E	H	I	L	F	T	C	C	H	N	R	H	L	V	L	P	P	.	.	.	.	T	R	R	R	L	L	S
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.						T	T					S		G	G	G	S			S	.	.						S	S	.				S	S		S	S		S	S								G	G	G	T	T					T	.	.	.	.	T	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.																					.	.								.																													.	.	.	.
Template SS confidence
													121	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140			.	.	.	.	.	.	.		.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.					.	.	.	.	180	.	.
		244	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	A	E	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		W	S	D	N
Template Known Secondary structure		T	T	S
Template Predicted Secondary structure
Template SS confidence
		183	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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