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Job DescriptionP0AF24
Confidence99.94%DateThu Jan 5 11:24:57 GMT 2012
Rank27Aligned Residues219
% Identity18%Templatec2hoqA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:putative had-hydrolase ph1655; PDBTitle: crystal structure of the probable haloacid dehalogenase (ph1655) from2 pyrococcus horikoshii ot3
Resolution1.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.... .....30.........40.........50.........60.........70.........80
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Query Sequence  TIKNVICDIDGVLMHDNVAVPGA. AEFLHGIMDKGLPLVLLTNYPSQTGQDLANRFATAGVDVPDSVFYTSAMATADFLR
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Template Sequence  MVKVIFFDLDDTLVDTSKLAEIARKNAIENMIRHGLP. . . . . . . . . . . . . . VDFETAYSELIELIKEYGSNFPYHFDYLL
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SBTTTB
TT

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TT
TT
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   1........10.........20.........30....... ..40.........50.........60......
 
   81........90.........100.........110.........120.........130.........140.........150.........160
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Query Sequence  RQEGKKAYVVGEGALIHELYKAGFTITDVNPDFVIVGETRSYNWDMMHKAAYFVANGARFIATNPDTHGRGFYPACGALC
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Template Sequence  RRLDLPYNPKWISAGVIAYHNTKFAY. . . . . . . . . . . . LREVPGARKVLIRLKELGYELGIITDGNPVKQWEKILRLELD
Template Known Secondary structure  TT



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TTT

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G
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   67..70.........80.........90.. .......100.........110.........120.........130....
 
   161........170.........180.........190.........200.........210.........220.........230.........240
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Query Sequence  AGIEKISGRKPFYVGKPSPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILVLSGVSSLDDIDSMPFRPSWI
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Template Sequence  DFFEHVIISDFEGVKKPHPKIFKKALKAFNVKPEEALMVGDRLYSDIYGAKRVGMKTVWFRYGKHSERELE. YRKYADYE
Template Known Secondary structure  GG
SGGGGT

TT
T

GGGS
TTTTTT


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T.TGGG
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   135....140.........150.........160.........170.........180.........190.........200..... ....210...
 
   241......
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Query Sequence  YPSVAEI
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Template Sequence  IDNLESL
Template Known Secondary structure  SSTT
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   214.....220
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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