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Job DescriptionP0AF24
Confidence100.00%DateThu Jan 5 11:24:57 GMT 2012
Rank11Aligned Residues238
% Identity22%Templatec2ho4A_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:haloacid dehalogenase-like hydrolase domain PDBTitle: crystal structure of protein from mouse mm.236127
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.........40.........50.........60.........70.........80..
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Query Sequence  IKNVICDIDGVLMHDNVAVPGAAEFLHGIMDKGLPLVLLTNYPSQTGQDLANRFATAGVDVPDSVFYTSAMATADFLRRQ
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Template Sequence  LKAVLVDLNGTLHIAVPG. . . AQEALKRLRATSVXVRFVTNTTKETKKDLLERLKKLEFEISEDEIFTSLTAARNLIEQK
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SSSSS



TT...TSS


SS

TT



GGG
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   7..10.........20.... .....30.........40.........50.........60.........70.........80...
 
   83......90.........100.........110.........120.........130.........140....... ..150.........
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Query Sequence  EGKKAYVVGEGALIHELYKAGFTITDVNPDFVIVGETRSYNWDMMHKAAYFVANGARFIATNPDT. . . HGRGFYPACGAL
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Template Sequence  QVRPXLLLDD. . . . RALPEFTGVQTQDPNAVVIGLAPEHFHYQLLNQAFRLLLDGAPLIAIHKARYYKRKDGLALGPGPF
Template Known Secondary structure  T

S
G....GGGGGGTT


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GGG
STT

S


STT
S
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   87..90...... ...100.........110.........120.........130.........140.........150.........160..
 
   160.........170.........180.........190.........200.........210.........220.........230.........
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Query Sequence  CAGIEKISGRKPFYVGKPSPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILVLSGVSSLDDIDSMPFRPSW
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Template Sequence  VTALEYATDTKAXVVGKPEKTFFLEALRDADCAPEEAVXIGDDCRDDVDGAQNIGXLGILVKTGKYKAADEEKINPPPYL
Template Known Secondary structure  T



STTSGGGGT

GGGS
TTTTTT
SSTT

TTGGGGSSS

S
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   163......170.........180.........190.........200.........210.........220.........230.........240..
 
   240.......
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Query Sequence  IYPSVAEI
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Template Sequence  TCESFPHA
Template Known Secondary structure  S
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   243......250
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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