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Job DescriptionP0AF24
Confidence100.00%DateThu Jan 5 11:24:57 GMT 2012
Rank9Aligned Residues246
% Identity31%Templatec1zjjA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:hypothetical protein ph1952; PDBTitle: crystal structure of hypothetical protein ph1952 from pyrococcus2 horikoshii ot3
Resolution1.85 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.........40.........50.........60.........70.........80..
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Query Sequence  IKNVICDIDGVLMHDNVAVPGAAEFLHGIMDKGLPLVLLTNYPSQTGQDLANRFATAGVDVPDSVFYTSAMATADFLRRQ
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Template Sequence  MVAIIFDMDGVLYRGNRAIPGVRELIEFLKERGIPFAFLTNNSTKTPEMYREKLLKMGIDVSSSIIITSGLATRLYMSKH
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BTTTTT
TTT

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   1........10.........20.........30.........40.........50.........60.........70.........80
 
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Query Sequence  EGKKAYVVGEGALIHEL. . . . . . . . . . YKAGFTITDVNPDFVIVGETRSYNWDMMHKAAYFVANGARFIATNPDT. . . HG
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Template Sequence  LDPGKIFVIGGEGLVKEMQALGWGIVTLDEARQGSWKEVKHVVVGLDPDLTYEKLKYATLAIRNGATFIGTNPDATLPGE
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S
TS
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TTGGGG




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   150.........160.........170.........180.........190.........200.........210.........220.........
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Query Sequence  RGFYPACGALCAGIEKISGRKPFYVGKPSPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILVLSGVSSLDD
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Template Sequence  EGIYPGAGSIIAALKVATNVEPIIIGKPNEPMYEVVREM. . FPGEELWMVGDRLDTDIAFAKKFGMKAIMVLTGVSSLED
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STTS..STT
S
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   161........170.........180.........190......... 200.........210.........220.........230........
 
   230.........240.........250
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Query Sequence  IDSMPFRPSWIYPSVAEIDVI
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Template Sequence  IKKSEYKPDLVLPSVYELIDY
Template Known Secondary structure  TT
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SSSGGGGGGG
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   239240.........250.........
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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