Return to main results Retrieve Phyre Job Id

Job DescriptionQ2M7R5
Confidence79.56%DateThu Jan 5 12:34:01 GMT 2012
Rank2Aligned Residues43
% Identity28%Templated2idob1
SCOP infoDNA polymerase III theta subunit-like DNA polymerase III theta subunit-like DNA polymerase III theta subunit-like
Resolution2.10

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   16...20.........30.........40.........50........
Predicted Secondary structure 














Query SS confidence 










































Query Sequence  VDFMASSQAFREYLKKLPPRNAIPSGIPDESVPLYLQRLEYYR
Query Conservation 










































Alig confidence 










































Template Conservation 




















 

 



 

 

 


  

Template Sequence  VDLAASGVAYKERLNIPVIAEQVAREQPENLRTYFMERLRHYR
Template Known Secondary structure  T



S
GGG
Template Predicted Secondary structure 





Template SS confidence 










































   1920.........30.........40.........50.........60.
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions