Return to main results Retrieve Phyre Job Id

Job DescriptionP0A9K3
Confidence99.82%DateThu Jan 5 11:10:33 GMT 2012
Rank2Aligned Residues143
% Identity22%Templated1w36d1
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Tandem AAA-ATPase domain
Resolution3.1

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   122.......130.........140.........150.........160...... ...170.........180.........190.........
Predicted Secondary structure 














..









Query SS confidence 












































. .
































Query Sequence  TPNQAQYIANILDHDITFGVGPAGTGKTYLAVAAAVDALERQEIR. . RILLTRPAVEAGEKLGFLPGDLSQKVDPYLRPL
Query Conservation 
  
   
 

    

   







 

 
 
   
      ..



 

 
 

  






  

  


 

Alig confidence 












































..






























..
Template Conservation     

 

          
 
 






     
  
          
 
 






  
 
              ..
Template Sequence  INWQKVAAAVALTRRISVISGGPGTGKTTTVAKLLAALIQMADGERCRIRLAAPTGKAAARLTESLGKALRQLPLTDE. .
Template Known Secondary structure 

TBS

TTSTT
SS



BSSTSS

S
..
Template Predicted Secondary structure 


















..
Template SS confidence 















































































   151........160.........170.........180.........190.........200.........210.........220........
 
   200.........210.........220........ .230.........240.........250.........260.........270.......
Predicted Secondary structure 






..

























Query SS confidence 




























. .
















































Query Sequence  YDALFEMLGFEKVEKLIERNVIEVAPLAY. . MRGRTLNDAFIILDESQNTTIEQMKMFLTRIGFNSKAVITGDVTQIDLP
Query Conservation   
 
                 


 

 
..





    







 
   

  


 
  




 

  




Alig confidence  ...............













..












































..

Template Conservation  ...............          
          
  
 







        

 
     






  
..
 
Template Sequence  . . . . . . . . . . . . . . . QKKRIPEDASTLHRLLHAGNPLHLDVLVVDEASMIDLPMMSRLIDALPDHARVIFLGDRDQ. . LA
Template Known Secondary structure  ...............


S
S


BTTTS


TTS

S
S
SGGG
BT

TT

TTS..GG
Template Predicted Secondary structure  ...............























..

Template SS confidence 















































































   229230.........240.........250.........260.........270.........280......... 290.
 
   278.280...
Predicted Secondary structure 




Query SS confidence 





Query Sequence  RNTKSG
Query Conservation      

Alig confidence 





Template Conservation 

  
 
Template Sequence  SVEAGA
Template Known Secondary structure  GTSTTB
Template Predicted Secondary structure 





Template SS confidence 





   303.....
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions