Job Description P0A9K3 Confidence 97.24% Date Thu Jan 5 11:10:33 GMT 2012 Rank 129 Aligned Residues 139 % Identity 18% Template c3mwyW_ PDB info PDB header:hydrolase Chain: W: PDB Molecule:chromo domain-containing protein 1; PDBTitle: crystal structure of the chromodomain-atpase portion of the yeast chd12 chromatin remodeler Resolution 3.70 Å

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		123	.	.	.	.	.	.	130	.	.	.	.					.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.		.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
Predicted Secondary structure														.	.	.	.																																		.
Query SS confidence														.	.	.	.																																		.
Query Sequence		P	N	Q	A	Q	Y	I	A	N	I	L	D	.	.	.	.	H	D	I	T	F	G	V	G	P	A	G	T	G	K	T	Y	L	A	V	A	A	A	V	D	A	L	E	R	Q	E	I	R	R	.	I	L	L	T	R	P	A	V	E	A	G	E	K	L	G	F	L	P	G	D	L	S	Q	K	V	D	P	Y	L	R
Query Conservation														.	.	.	.																																		.
Alig confidence														.	.	.	.																																		.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	F	Q	L	T	G	I	N	W	M	A	F	L	W	S	K	G	D	N	G	I	L	A	D	E	M	G	L	G	K	T	V	Q	T	V	A	F	I	S	W	L	I	F	A	R	R	Q	N	G	P	H	I	I	V	V	P	L	S	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	M	P	A	W	L	D
Template Known Secondary structure		T														T	T	T									T	T	S	S	T	T															S			S								T	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		378	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.																.	.	.	440	.	.
		198	.	200	.	.	.	.	.	.						.	.	.	210	.	.	.	.	.	.	.												.	.	220	.	.	.	.	.	.	.	.	.	230	.						.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.			.	.	250	.	.	.	.
Predicted Secondary structure											.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.																	.	.
Query SS confidence											.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.																	.	.
Query Sequence		P	L	Y	D	A	L	F	E	M	.	.	.	.	.	L	G	F	E	K	V	E	K	L	I	E	.	.	.	.	.	.	.	.	.	.	.	R	N	V	I	E	V	A	P	L	A	Y	M	R	G	.	.	.	.	.	R	T	L	N	D	A	F	I	I	L	D	E	S	Q	N	T	.	.	T	I	E	Q	M	K	M
Query Conservation											.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.																	.	.
Alig confidence											.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.																	.	.
Template Conservation
Template Sequence		T	F	E	K	W	A	P	D	L	N	C	I	C	Y	M	G	N	Q	K	S	R	D	T	I	R	E	Y	E	F	Y	T	N	P	K	T	M	K	F	N	V	L	L	T	T	Y	E	Y	I	L	K	D	R	A	E	L	G	S	I	K	W	Q	F	M	A	V	D	E	A	H	R	L	K	N	A	E	S	S	L	Y	E
Template Known Secondary structure							S	T	T									S	S											S		S								S						T	T					T						T	S								T	T	G	G	G	G			S	S	S
Template Predicted Secondary structure
Template SS confidence
		443	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.
		255	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	L	T	R	I	G	F	N	S	K	A	V	I	T	G	D	V	T	Q	I	D	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	L	N	S	F	K	V	A	N	R	M	L	I	T	G	T	P	L	Q	N	N	I
Template Known Secondary structure				T	T	S										S				S	S		S
Template Predicted Secondary structure
Template SS confidence
		528	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions