 |
Job Description | P0A9K3 | Confidence | 90.51% | Date | Thu Jan 5 11:10:33 GMT 2012 |
Rank | 451 | Aligned Residues | 44 |
% Identity | 14% | Template | c3dzdA_ |
PDB info |
PDB header:transcription regulator | Chain: A: PDB Molecule:transcriptional regulator (ntrc family); |
PDBTitle: crystal structure of sigma54 activator ntrc4 in the inactive2 state
|
Resolution | 2.40 Å |
|
  |   |
125 | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Q | A | Q | Y | I | A | N | I | L | D | H | D | I | T | F | G | V | G | P | A | G | T | G | K | T | Y | L | A | V | A | A | A | V | D | A | L | E | R | Q | E | I | R | R | I |
Query Conservation |   |
|   |   |   |
|   |
|
|   |   |   |   |
|
|   |   |   |
|
|
|
|
|
|
|
|   |
|
|   |
|   |
|   |   |   |
|   |   |   |   |   |   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|   |   |   |
|   |   |   |   |   |
|
|
|   |
|
|   |
|
|
|
|   |   |   |
|   |   |
|
|   |   |
|   |   |   |   |   |
|
|   |
|
Template Sequence |   |
K | R | L | I | P | K | I | A | K | S | K | A | P | V | L | I | T | G | E | S | G | T | G | K | E | I | V | A | R | L | I | H | R | Y | S | G | R | K | G | A | F | V | D | L |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  | T | S |
| S |
|  |  |  |  |
|
| T | T | S | S |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
| S |
|  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
143 | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|