 |
Job Description | P0A9K3 | Confidence | 91.65% | Date | Thu Jan 5 11:10:33 GMT 2012 |
Rank | 434 | Aligned Residues | 81 |
% Identity | 14% | Template | c3ch4B_ |
PDB info |
PDB header:transferase | Chain: B: PDB Molecule:phosphomevalonate kinase; |
PDBTitle: the crystal structure of human phosphomavelonate kinase at2 1.8 a resolution
|
Resolution | 1.76 Å |
|
 |
  |   |
137 | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | T | F | G | V | G | P | A | G | T | G | K | T | Y | L | A | V | A | A | A | V | D | A | L | E | R | Q | E | I | R | R | I | L | L | T | R | P | A | V | E | A | G | E | K | L | G | F | L | P | G | D | L | S | Q | K | V | D | P | Y | L | R | P | L | Y | D | A | L | F | E | M | L | G | F | E | K | V | E | K | L | I |
Query Conservation |   |
|
|   |   |   |
|
|
|
|
|
|
|
|   |
|
|   |
|   |
|   |   |   |
|   |   |   |   |   |   |
|
|
|
|   |
|
|   |
|   |
|
|   |   |
|
|
|
|
|
|
|   |   |
|
|   |   |
|
|
|   |
|
|   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |
|
|
|   |   |
|
|
|
|
| . |
|
|
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
V | L | L | F | S | G | K | R | K | S | G | K | D | . |
F | V | T | E | A | L | Q | S | R | L | G | A | D | V | C | A | V | L | R | L | S | G | P | L | K | E | Q | Y | A | Q | E | H | G | L | N | F | Q | Y | K | E | A | F | R | K | D | M | I | R | W | G | E | E | K | R | Q | A | D | P | G | F | F | C | R | K | I | V |
Template Known Secondary structure |   |
 |  |  |  |  |  |
| T | T | S | S |  |  | . |  |  |  |  |  |  |  |  |  |  |
| T | T | T |  |  |  |  |
| T |  |  |  |  |  |  |  |  |  |  | T | T | T |
|
|
|
|
|
| S | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| T | T | T | T |  |  |  |  | S |
Template Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|
|
|  |  | . |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
11 | . | . | . | . | . | . | . | . | 20 | . | . | . | |
. | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . |
  |
  |   |
217 | . |
Predicted Secondary structure |   |
 |
|
Query SS confidence |   |
|
|
Query Sequence |   |
E | R |
Query Conservation |   |
  |   |
Alig confidence |   |
|
|
Template Conservation |   |
  |   |
Template Sequence |   |
E | G |
Template Known Secondary structure |   |
B | T |
Template Predicted Secondary structure |   |
 |  |
Template SS confidence |   |
|
|
  |   |
97 | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|