Job Description P0A9K3 Confidence 97.35% Date Thu Jan 5 11:10:33 GMT 2012 Rank 117 Aligned Residues 97 % Identity 22% Template c3cf1C_ PDB info PDB header:transport protein Chain: C: PDB Molecule:transitional endoplasmic reticulum atpase; PDBTitle: structure of p97/vcp in complex with adp/adp.alfx Resolution 4.40 Å

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		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	F	G	V	G	P	A	G	T	G	K	T	Y	L	A	V	A	A	A	V	D	A	L	E	R	Q	E	I	R	R	I	L	L	T	R	P	A	V	E	A	G	E	K	L	G	F	L	P	G	D	L	S	Q	K	V	D	P	Y	L	R	P	L	Y	D	A	L	F	E	M	L	G	F	E	K	V	E	K	L	I	E
Query Conservation
Alig confidence																								.	.	.	.	.																				.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.
Template Conservation																								.	.	.	.	.																				.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	L	L	Y	G	P	P	G	T	G	K	T	L	I	A	R	A	V	A	N	E	T	.	.	.	.	.	G	A	F	F	F	L	I	N	G	P	E	I	M	S	K	L	A	G	E	.	.	.	.	.	.	.	.	S	E	S	N	L	R	K	A	F	E	E	A	E	K	N	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure						S		T	T	S														.	.	.	.	.	T								T	T					S		T	T		.	.	.	.	.	.	.	.															T	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																								.	.	.	.	.																				.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.						.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.									.	.	.	.	.	.	.	.	290	.	.	.	.	.	.
		218	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.															.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.
Predicted Secondary structure																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	N	V	I	E	V	A	P	L	A	Y	M	R	G	R	T	L	N	D	A	F	I	I	L	D	E	S	Q	N	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	E	Q	M	K	M	F	L	T	R	I	G	F	N	S	K	A	V	I	T	G	D	V	T	Q	I	D
Query Conservation																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	P	A	I	I	F	I	D	E	L	D	A	I	A	P	K	R	E	K	T	H	G	E	V	E	R	R	I	V	S	Q	L	L	T	L	M	D	G	L	K	Q	R	A	H	V	I	V	M	A	A	T	N	R	P	N
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S							T	G	G	G	T				S	S				S															T	T	T	T	S	T	T									S		T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																			297	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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