Return to main results Retrieve Phyre Job Id

Job DescriptionP0A9K3
Confidence97.65%DateThu Jan 5 11:10:33 GMT 2012
Rank88Aligned Residues108
% Identity13%Templatec3bxzA_
PDB info PDB header:transport proteinChain: A: PDB Molecule:preprotein translocase subunit seca; PDBTitle: crystal structure of the isolated dead motor domains from2 escherichia coli seca
Resolution3.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   122.......130.........140.........150.........160.........170.........180.........190.........200.
Predicted Secondary structure 
























Query SS confidence 















































































Query Sequence  TPNQAQYIANILDHDITFGVGPAGTGKTYLAVAAAVDALERQEIRRILLTRPAVEAGEKLGFLPGDLSQKVDPYLRPLYD
Query Conservation 
  
   
 

    

   







 

 
 
   
      



 

 
 

  






  

  


 

 
Alig confidence 














..

























..













...........









Template Conservation     
  

       ..
    






   
          ..   

 

  

 
...........          
Template Sequence  FDVQLLGGMVLNERC. . IAEMRTGEGKTLTATLPAYLNALTGK. . GVHVVTVNDYLAQR. . . . . . . . . . . DAENNRPLFE
Template Known Secondary structure 
TTTT..

TTS
TTTSSS..
SS...........TT
Template Predicted Secondary structure 



..







..


...........
Template SS confidence 















































































   84.....90........ .100.........110.........120.... .....130........ .140........
 
   202.. .....210.........220..... ....230...... ...240....
Predicted Secondary structure  .......





............








.


Query SS confidence 


. . . . . . .




















. . . . . . . . . . . .










.







Query Sequence  ALF. . . . . . . EMLGFEKVEKLIERNVIEVAP. . . . . . . . . . . . LAYMRGRTLND. AFIILDES
Query Conservation   
 .......                


 
............
 






  .  





Alig confidence 


.......




















............










.







Template Conservation    
                      


 
   
    
                  





Template Sequence  FLGLTVGINLPGMPAPAKREAYAADITYGTNNEYGFDYLRDNMAFSPEERVQRKLHYALVDEV
Template Known Secondary structure  TT



TT

SST
SSGGG



S

T
Template Predicted Secondary structure 

























Template SS confidence 






























































   149150.........160.........170.........180.........190.........200.........210.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions