Job Description P0A9K3 Confidence 98.01% Date Thu Jan 5 11:10:33 GMT 2012 Rank 53 Aligned Residues 138 % Identity 21% Template c3berA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:probable atp-dependent rna helicase ddx47; PDBTitle: human dead-box rna-helicase ddx47, conserved domain i in complex with2 amp Resolution 1.40 Å

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		117	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.		.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
Predicted Secondary structure																																											.
Query SS confidence																																											.
Query Sequence		V	I	K	P	R	T	P	N	Q	A	Q	Y	I	A	N	I	L	D	H	D	I	T	F	G	V	G	P	A	G	T	G	K	T	Y	L	A	V	A	A	A	V	.	D	A	L	E	R	Q	E	I	R	R	I	L	L	T	R	P	A	V	E	A	G	E	K	L	G	F	L	P	G	D	L	S	Q	K	V	D	P	Y
Query Conservation																																											.
Alig confidence																																											.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	W	T	K	P	T	K	I	Q	I	E	A	I	P	L	A	L	Q	G	R	D	I	I	G	L	A	E	T	G	S	G	K	T	G	A	F	A	L	P	I	L	N	A	L	L	E	T	P	Q	R	L	F	A	L	V	L	T	P	T	R	E	L	A	F	Q	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		T			S														T	T									T	T	S																	S			S	S							S	S								.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		43	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
		196	.	.	.	200	.	.	.	.	.	.	.	.													.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.								.	230	.	.	.	.	.	.		.	.	.	240	.	.	.	.					.	.	.	.	.	250	.
Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.									.									.	.	.	.
Query SS confidence															.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.									.									.	.	.	.
Query Sequence		L	R	P	L	Y	D	A	L	F	E	M	L	G	.	.	.	.	.	.	.	.	.	.	.	.	F	E	K	V	E	K	L	I	E	R	N	V	I	E	V	A	P	L	A	Y	.	.	.	.	.	.	.	M	R	G	R	T	L	N	D	.	A	F	I	I	L	D	E	S	.	.	.	.	Q	N	T	T	I	E	Q
Query Conservation															.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.									.									.	.	.	.
Alig confidence		.													.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.									.									.	.	.	.
Template Conservation		.
Template Sequence		.	S	E	Q	F	E	A	L	G	S	S	I	G	V	Q	S	A	V	I	V	G	G	I	D	S	M	S	Q	S	L	A	L	A	K	K	P	H	I	I	I	A	T	P	G	R	L	I	D	H	L	E	N	T	K	G	F	N	L	R	A	L	K	Y	L	V	M	D	E	A	D	R	I	L	N	M	D	F	E	T	E
Template Known Secondary structure		.									G	G	G	T								T	T	S											T			S																S	T	T				T	T								S							T	T
Template Predicted Secondary structure		.
Template SS confidence
			109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.
		252	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	K	M	F	L	T	R	I	G	F	N	S	K	A	V	I	T	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	D	K	I	L	K	V	I	P	R	D	R	K	T	F	L	F	S
Template Known Secondary structure								S	S		S	S	S
Template Predicted Secondary structure
Template SS confidence
		188	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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