Job Description P0A9K3 Confidence 98.87% Date Thu Jan 5 11:10:33 GMT 2012 Rank 18 Aligned Residues 119 % Identity 24% Template c2xgjA_ PDB info PDB header:hydrolase/rna Chain: A: PDB Molecule:atp-dependent rna helicase dob1; PDBTitle: structure of mtr4, a dexh helicase involved in nuclear rna2 processing and surveillance Resolution 2.90 Å

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		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	R	T	P	N	Q	A	Q	Y	I	A	N	I	L	D	H	D	I	T	F	G	V	G	P	A	G	T	G	K	T	Y	L	A	V	A	A	A	V	D	A	L	E	R	Q	E	I	R	R	I	L	L	T	R	P	A	V	E	A	G	E	K	L	G	F	L	P	G	D	L	S	Q	K	V	D	P	Y	L	R	P	L
Query Conservation
Alig confidence																																															.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																															.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	L	D	P	F	Q	D	T	A	I	S	C	I	D	R	G	E	S	V	L	V	S	A	H	T	S	A	G	K	T	V	V	A	E	Y	A	I	A	Q	S	L	K	N	K	Q	.	.	R	V	I	Y	T	S	P	I	K	A	L	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	Q	K
Template Known Secondary structure																	T									T	T	S																T	T		.	.							S	S					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																															.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.			.	.	.	.	.	.	200	.	.	.	.	.																			.	.	.
		200	.	.	.	.	.	.	.	.																						.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.					.	250	.	.	.	.
Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																									.	.	.	.
Query SS confidence											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																									.	.	.	.
Query Sequence		Y	D	A	L	F	E	M	L	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	E	K	V	E	K	L	I	E	R	N	V	I	E	V	A	P	L	A	Y	M	R	G	R	T	L	N	D	A	F	I	I	L	D	E	S	Q	N	T	T	.	.	.	.	I	E	Q	M	K	M
Query Conservation											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																									.	.	.	.
Alig confidence											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.												.	.	.	.
Template Conservation																																																			.	.	.	.	.	.	.	.	.	.
Template Sequence		Y	R	E	L	L	A	E	F	G	D	V	G	L	M	T	G	D	I	T	I	N	P	D	A	G	C	L	V	M	T	T	E	I	L	R	S	M	L	Y	R	G	S	E	V	M	R	E	V	A	.	.	.	.	.	.	.	.	.	.	W	V	I	F	D	E	V	H	Y	M	R	D	K	E	R	G	V	V	W	E	E
Template Known Secondary structure										S							S	S					T	T		S																T		T	T	G	G	G			.	.	.	.	.	.	.	.	.	.						T	G	G	G	G	G		T	T	T
Template Predicted Secondary structure																																																			.	.	.	.	.	.	.	.	.	.
Template SS confidence
		209	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.											.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.
		255	.	.	.	.	260	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	L	T	R	I	G	F	N	S	K	A	V	I	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	I	I	L	L	P	D	K	V	R	Y	V	F	L
Template Known Secondary structure						S		T	T
Template Predicted Secondary structure
Template SS confidence
		279	280	.	.	.	.	.	.	.	.	.	290	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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