Return to main results Retrieve Phyre Job Id

Job DescriptionP0A9K3
Confidence97.68%DateThu Jan 5 11:10:33 GMT 2012
Rank83Aligned Residues144
% Identity19%Templatec2w00B_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:hsdr; PDBTitle: crystal structure of the hsdr subunit of the ecor124i2 restriction enzyme in complex with atp
Resolution2.6 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   109110.........120.........130.... .....140.........150.........160.........170....
Predicted Secondary structure 









..............














Query SS confidence 

























. . . . . . . . . . . . . .







































Query Sequence  VNIKTKRGVIKPRTPNQAQYIANILD. . . . . . . . . . . . . . HDITFGVGPAGTGKTYLAVAAAVDALERQEIRRILLTRPA
Query Conservation           
 
 
  
   
 

  ..............  

   







 

 
 
   
      



 

 
Alig confidence 












.











..............







































Template Conservation              
.  
  

      
               
 









 
    
  
        

 
 

Template Sequence  SVFDSSQTLLVXR. PYQIAATERILWKIKSSFTAKNWSKPESGGYIWHTTGSGKTLTSFKAARLATELDFIDKVFFVVDR
Template Known Secondary structure 
TT



.TT

SSGGGS
TTSSTT
TT


G
Template Predicted Secondary structure 



.
























Template SS confidence 















































































   261........270... ......280.........290.........300.........310.........320.........330.........
 
   175....180.........190.........200........ .210....... ..220......... 230.......
Predicted Secondary structure 








..........





.......







Query SS confidence 

































. . . . . . . . .








.











. . . . . . .







Query Sequence  VEAGEKLGFLPGDLSQKVDPYLRPLYDALFEMLG. . . . . . . . . FEKVEKLIE. RNVIEVAPLAYM. . . . . . . RGRTLNDA
Query Conservation 
 

  






  

  


 

 
 
     .........         .   


 

 

.......




   
Alig confidence 



..................











.........








.











.......







Template Conservation    
 .................. 
    
                
   
      








               
Template Sequence  KDLD. . . . . . . . . . . . . . . . . . YQTXKEYQRFSPDSVNGSENTAGLKRNLDKDDNKIIVTTIQKLNNLXKAESDLPVYNQ
Template Known Secondary structure  GG

..................TTSTT
SSSS



SS





GGGGS
Template Predicted Secondary structure  ..................


























Template SS confidence 















































































   340... ......350.........360.........370.........380.........390.........400.
 
   238.240.........250.. .......260.........270.
Predicted Secondary structure  ..





.







Query SS confidence  . .














.


















Query Sequence  . . FIILDESQNTTIEQM. KMFLTRIGFNSKAVITGDV
Query Conservation  .. 







 
   
.
  


 
  




 

 
Alig confidence  ..














.


















Template Conservation     









 
     
   
 

  






Template Sequence  QVVFIFDECHRSQFGEAQKNLKKKFKRYYQFGFTGTP
Template Known Secondary structure  S

TT
SSS
Template Predicted Secondary structure 












Template SS confidence 




































   402.......410.........420.........430........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions