Job Description P0A9K3 Confidence 98.08% Date Thu Jan 5 11:10:33 GMT 2012 Rank 48 Aligned Residues 118 % Identity 16% Template c2vbcA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:dengue 4 ns3 full-length protein; PDBTitle: crystal structure of the ns3 protease-helicase from dengue2 virus Resolution 3.15 Å

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		132	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	L	D	H	D	I	T	F	G	V	G	P	A	G	T	G	K	T	Y	L	A	V	A	A	A	V	D	A	L	E	R	Q	E	I	R	R	I	L	L	T	R	P	A	V	E	A	G	E	K	L	G	F	L	P	G	D	L	S	Q	K	V	D	P	Y	L	R	P	L	Y	D	A	L	F	E	M	L	G	F	E	K
Query Conservation
Alig confidence																																			.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																			.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		F	R	K	K	R	L	T	I	M	D	L	H	P	G	A	G	K	T	K	R	I	L	P	S	I	V	R	E	A	L	K	R	R	.	L	R	T	L	I	L	A	P	T	R	V	V	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	E	M	E	E	A	L	R	G	L	P	I	R	Y	Q
Template Known Secondary structure			S	T	T									T	T	T			T	T	T												T	T	.								S	S					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							T	T	T	S
Template Predicted Secondary structure																																			.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.		.	.	.	.	220	.	.	.	.	.	.	.	.																			.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
		212	.	.	.	.	.	.	.	220					.	.	.	.	.	.	.	.						.	230	.	.	.	.	.	.		.	.	.	240	.	.	.	.	.	.	.	.	.	250	.				.	.	.	.	.	.	.	.	260		.	.	.	.	.	.	.	.
Predicted Secondary structure											.	.	.	.									.	.	.	.	.									.																.	.	.										.
Query SS confidence											.	.	.	.									.	.	.	.	.									.																.	.	.										.
Query Sequence		V	E	K	L	I	E	R	N	V	.	.	.	.	I	E	V	A	P	L	A	Y	.	.	.	.	.	M	R	G	R	T	L	N	D	.	A	F	I	I	L	D	E	S	Q	N	T	T	I	E	Q	.	.	.	M	K	M	F	L	T	R	I	G	.	F	N	S	K	A	V	I	T
Query Conservation											.	.	.	.									.	.	.	.	.									.																.	.	.										.
Alig confidence											.	.	.	.									.	.	.	.	.									.																.	.	.										.
Template Conservation
Template Sequence		T	P	A	V	K	S	D	H	T	G	R	E	I	V	D	L	M	C	H	A	T	F	T	T	R	L	L	S	S	T	R	V	P	N	Y	N	L	I	V	M	D	E	A	H	F	T	D	P	C	S	V	A	A	R	G	Y	I	S	T	R	V	E	M	G	E	A	A	A	I	F	M
Template Known Secondary structure			T	T		S						S	S																		S						S						S	T	T			S																	T	S
Template Predicted Secondary structure
Template SS confidence
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions