 |
Job Description | P0A9K3 | Confidence | 97.13% | Date | Thu Jan 5 11:10:33 GMT 2012 |
Rank | 135 | Aligned Residues | 60 |
% Identity | 23% | Template | c2v1xB_ |
PDB info |
PDB header:hydrolase | Chain: B: PDB Molecule:atp-dependent dna helicase q1; |
PDBTitle: crystal structure of human recq-like dna helicase
|
Resolution | 2.00 Å |
|
 |
  |   |
117 | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . |
Predicted Secondary structure |   |
|
|  |  |
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | I | K | P | R | T | P | N | Q | A | Q | Y | I | A | N | I | L | D | H | D | I | T | F | G | V | G | P | A | G | T | G | K | T | Y | L | A | V | A | A | A | V | D | A | L | E | R | Q | E | I | R | R | I | L | L | T | R | P | A | V | E | A | G | E | K | L |
Query Conservation |   |
  |
|   |
|   |
|   |   |
|   |   |   |
|   |
|
|   |   |   |   |
|
|   |   |   |
|
|
|
|
|
|
|
|   |
|
|   |
|   |
|   |   |   |
|   |   |   |   |   |   |
|
|
|
|   |
|
|   |
|   |
|
|   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |   |
|
|   |
|   |   |
|
|   |   |
|
|   |
|   |
|
|
|
|   |
|
|
|
|
|
|
|
|
|   |   |   |
|
|   |
| . | . | . | . | . |   |   |   |   |   |   |
|
|
|   |
|   |   |   |
|   |   |
|   |
Template Sequence |   |
K | L | E | K | F | R | P | L | Q | L | E | T | I | N | V | T | M | A | G | K | E | V | F | L | V | M | P | T | G | G | G | K | S | L | C | Y | Q | L | P | A | L | . |
. |
. |
. |
. |
C | S | D | G | F | T | L | V | I | C | P | L | I | S | L | M | E | D | Q |
Template Known Secondary structure |   |
|
|
| S |
|
| T | T |  |  |  |  |  |  |  |  |  | T | T |
|
|  |  |  |  |
|
| T | T | S |
|
| T |  |  |  |  |  |  |  |  | . | . | . | . | . | S | S | S | S |  |  |  |  |  |
| S |
|  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |  |
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
88 | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | |
|
|
|
|
. | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|