 |
Job Description | P0A9K3 | Confidence | 95.58% | Date | Thu Jan 5 11:10:33 GMT 2012 |
Rank | 239 | Aligned Residues | 45 |
% Identity | 20% | Template | c2v1uA_ |
PDB info |
PDB header:replication | Chain: A: PDB Molecule:cell division control protein 6 homolog; |
PDBTitle: structure of the aeropyrum pernix orc1 protein in complex2 with dna
|
Resolution | 3.10 Å |
|
  |   |
118 | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | |
|
|
|
|
|
. | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . |
Predicted Secondary structure |   |
|  |  |
|
|  |  |  |  |  |  |  |  |  |  |
|
|
| . | . | . | . | . | . |
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | K | P | R | T | P | N | Q | A | Q | Y | I | A | N | I | L | D | H | . |
. |
. |
. |
. |
. |
D | I | T | F | G | V | G | P | A | G | T | G | K | T | Y | L | A | V | A | A | A | V | D | A | L | E | R |
Query Conservation |   |
|   |
|   |
|   |   |
|   |   |   |
|   |
|
|   |   |   | . | . | . | . | . | . |   |
|
|   |   |   |
|
|
|
|
|
|
|
|   |
|
|   |
|   |
|   |   |   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|
|   |
|   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|
|
|   |
|   |   |
|   |
|
|
|   |
|
|   |   |   |   |   |   |
|   |   |   |
Template Sequence |   |
L | P | H | R | E | A | E | L | R | R | L | A | E | V | L | A | P | A | L | R | G | E | K | P | S | N | A | L | L | Y | G | L | T | G | T | G | K | T | A | V | A | R | L | V | L | R | R | L | E | A | R |
Template Known Secondary structure |   |
| T | T |
|  |  |  |  |  |  |  |  |  | T | T | G | G | G | T | S | S |
|
|
|
|
|  |  |  |
| B |
| T | T | S | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
33 | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|