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Job DescriptionP0A9K3
Confidence99.31%DateThu Jan 5 11:10:33 GMT 2012
Rank13Aligned Residues158
% Identity27%Templatec1uaaB_
PDB info PDB header:hydrolase/dnaChain: B: PDB Molecule:protein (atp-dependent dna helicase rep.); PDBTitle: e. coli rep helicase/dna complex
Resolution3.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   122.......130.........140.........150.........160..... ....170.........180.........190......
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Query Sequence  TPNQAQYIANILDHDITFGVGPAGTGKTYLAVAAAVDALERQEI. . RRILLTRPAVEAGEKLGFLPGDLSQKVDPYL. . .
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Template Sequence  NPGQQQAVEF. . VTGPCLVLAGAGSGKTRVITNKIAHLIRGCGYQARHIAAVTFTNKAAREM. . . . . . . KERVGQTLGRK
Template Known Secondary structure 

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SS

TTS



GGGSS.......S
TT
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   4.....10... ......20.........30.........40.........50.........60... ......70....
 
  
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  EARGLMISTFHTLGLDIIKREYAALGMKANFSLFDDTDQLALLKELTEGLIEDDKVLLQQLISTISNWKNDLKTPSQAAA
Template Known Secondary structure  TT
S


TTSS





B
TTTSSSS
S
TT

TT
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   75....80.........90.........100.........110.........120.........130.........140.........150....
 
   197..200.........210.........220.........230.........240......
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . RPLYDALFEMLGFEKVEKLIERNVIEVAPLAYMRGRTLNDAFIILDESQN
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Template Sequence  SAIGERDRIFAHCYGLYDAHLKACNVLDFDDLILLPTLLLQANEEVRKRWQNK. . . . . . . . . . . . . . . . IRYLLVDEYQD
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ST
B
TTT
TT................SSS
GGG
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   155....160.........170.........180.........190.........200....... ..210........
 
   247..250.........260.........270.........280.........290.........300.....
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Query Sequence  TTIEQMKMFLTRIGFNSKAVITGDVTQIDLPRNTKSGLRHAIEVLADVEEISFNFFHSE
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Template Sequence  TNTSQYELVKLLVGSRARFTVVGDDDQSI. YSWRGARPQNLVLLSQDFPALKVIKLEQN
Template Known Secondary structure 
BSSSS



GGG

.GGGGTB
TTS
TT

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   219220.........230.........240....... ..250.........260.........270......
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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