Job Description P0A9K3 Confidence 99.04% Date Thu Jan 5 11:10:33 GMT 2012 Rank 15 Aligned Residues 150 % Identity 20% Template c1pjrA_ PDB info PDB header:helicase Chain: A: PDB Molecule:pcra; PDBTitle: structure of dna helicase Resolution 2.50 Å

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		122	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.			.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
Predicted Secondary structure																																														.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																														.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	P	N	Q	A	Q	Y	I	A	N	I	L	D	H	D	I	T	F	G	V	G	P	A	G	T	G	K	T	Y	L	A	V	A	A	A	V	D	A	L	E	R	Q	E	I	.	.	R	R	I	L	L	T	R	P	A	V	E	A	G	E	K	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																														.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence												.	.																																	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation												.	.
Template Sequence		N	K	E	Q	Q	E	A	V	R	T	.	.	T	E	G	P	L	L	I	M	A	G	A	G	S	G	K	T	R	V	L	T	H	R	I	A	Y	L	M	A	E	K	H	V	A	P	W	N	I	L	A	I	T	F	T	N	K	A	A	R	E	M	R	E	R	V	Q	S	L	L	G	G	A	A	E	D	V	W	I	S
Template Known Secondary structure												.	.		S	S								T	T	S																T	T				G	G	G						S	S																G	G	G	G	T	T	S
Template Predicted Secondary structure												.	.
Template SS confidence
		13	.	.	.	.	.	.	20	.	.			.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
																																																																							182	.	.	.	.	.	.	.	190	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	F	L	P	G	D	L	S	Q	K	V
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	F	H	S	M	C	V	R	I	L	R	R	D	I	D	R	I	G	I	N	R	N	F	S	I	L	D	P	T	D	Q	L	S	V	M	K	T	I	L	K	E	K	N	I	D	P	K	K	F	E	P	R	T	I	L	G	T	I	S	A	A	K	N	E	L	L	P	P	E	Q	F	A	K	R	Y	Y	E	K	V	V
Template Known Secondary structure															G	G	G	G	T			T	T																			T	T	S		T	T	T	T																T	T							T	T
Template Predicted Secondary structure
Template SS confidence
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
		193	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	P	Y	L	R	P	L	Y	D	A	L	F	E	M	L	G	F	E	K	V	E	K	L	I	E	R	N	V	I	E	V	A	P	L	A	Y	M	R	G	R	T	L	N	D	A	F	I	I	L	D	E	S	Q	N	T	T	I	E	Q	M	K	M	F	L	T	R	I	G	F	N	S	K	A	V	I	T	G	D	V	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	D	V	Y	Q	E	Y	Q	Q	R	L	L	R	N	H	S	L	D	F	D	D	L	I	M	T	T	I	Q	L	F	D	R	V	P	D	V	L	H	Y	Y	Q	Y	K	F	Q	Y	I	H	I	D	E	Y	Q	D	T	N	R	A	Q	Y	T	L	V	K	K	L	A	E	R	F	Q	N	I	C	A	V	G	D	A	D
Template Known Secondary structure															T	T				T	T																									S					S	S	G	G	G														T	T	T									G	G
Template Predicted Secondary structure
Template SS confidence
		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.
		273
Predicted Secondary structure
Query SS confidence
Query Sequence		Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q
Template Known Secondary structure		G
Template Predicted Secondary structure
Template SS confidence
		254

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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