Job Description P0A9K3 Confidence 98.41% Date Thu Jan 5 11:10:33 GMT 2012 Rank 28 Aligned Residues 121 % Identity 20% Template c1gm5A_ PDB info PDB header:helicase Chain: A: PDB Molecule:recg; PDBTitle: structure of recg bound to three-way dna junction Resolution 3.24 Å

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		122	.	.	.	.	.	.	.	130	.	.	.	.	.							.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
Predicted Secondary structure																.	.	.	.	.	.
Query SS confidence																.	.	.	.	.	.
Query Sequence		T	P	N	Q	A	Q	Y	I	A	N	I	L	D	H	.	.	.	.	.	.	D	I	T	F	G	V	G	P	A	G	T	G	K	T	Y	L	A	V	A	A	A	V	D	A	L	E	R	Q	E	I	R	R	I	L	L	T	R	P	A	V	E	A	G	E	K	L	G	F	L	P	G	D	L	S	Q	K	V	D	P	Y
Query Conservation																.	.	.	.	.	.
Alig confidence																.	.	.	.	.	.																														.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																			.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	N	A	Q	K	R	A	H	Q	E	I	R	N	D	M	I	S	E	K	P	M	N	R	L	L	Q	G	D	V	G	S	G	K	T	V	V	A	Q	L	A	I	L	D	N	Y	E	A	G	F	.	.	Q	T	A	F	M	V	P	T	S	I	L	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure																		S	S	S										S	S	S	S																T	S	.	.							S						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																			.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.			.	420	.	.	.	.	.	.	.	.	.	430
		196	.	.	.	200	.	.	.	.	.	.	.	.	.																210	.	.	.	.	.	.						.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.		.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.
Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.	.	.	.																					.
Query SS confidence																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.	.	.	.																					.
Query Sequence		L	R	P	L	Y	D	A	L	F	E	M	L	G	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	K	V	E	K	L	I	.	.	.	.	.	E	R	N	V	I	E	V	A	P	L	A	Y	M	R	G	R	T	L	N	D	.	A	F	I	I	L	D	E	S	Q	N	T	T	I	E	Q	M	K	M
Query Conservation																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.	.	.	.																					.
Alig confidence		.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.	.	.	.																					.														.	.	.	.	.
Template Conservation		.																																																																											.	.	.	.	.
Template Sequence		.	I	Q	H	Y	R	R	T	V	E	S	F	S	K	F	N	I	H	V	A	L	L	I	G	A	T	T	P	S	E	K	E	K	I	K	S	G	L	R	N	G	Q	I	D	V	V	I	G	T	H	A	L	I	Q	E	D	V	H	F	K	N	L	G	L	V	I	I	D	E	Q	H	R	F	E	A	.	.	.	.	.
Template Known Secondary structure		.												T		S	S								S	S	S														S	S									T	T									S									S							.	.	.	.	.
Template Predicted Secondary structure		.																																																																											.	.	.	.	.
Template SS confidence
			431	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.
		255	.	.	.	.	260	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	L	T	R	I	G	F	N	S	K	A	V	I	T
Query Conservation
Alig confidence		.
Template Conservation		.
Template Sequence		.	L	M	N	K	G	K	M	V	D	T	L	V	M
Template Known Secondary structure		.			S	S	S	S
Template Predicted Secondary structure		.
Template SS confidence
			510	.	.	.	.	.	.	.	.	.	520	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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