Job Description P39410 Confidence 23.79% Date Thu Jan 5 12:00:47 GMT 2012 Rank 365 Aligned Residues 47 % Identity 17% Template d1sd4a_ SCOP info DNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain Penicillinase repressor Resolution 2.00

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.					.	.	.	.	.	.	.	30	.	.	.	.				.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50
Predicted Secondary structure																					.	.	.	.													.	.	.
Query SS confidence																					.	.	.	.													.	.	.
Query Sequence		L	T	D	L	L	L	Q	G	P	R	S	A	P	E	L	R	Q	R	L	.	.	.	.	A	I	S	Q	A	T	F	S	R	L	V	A	.	.	.	R	E	D	R	V	I	R	F	G	K	A	R	A	T	R	Y
Query Conservation																					.	.	.	.													.	.	.
Alig confidence																					.	.	.	.													.	.	.
Template Conservation
Template Sequence		X	N	I	I	W	D	K	K	S	V	S	A	N	E	I	V	V	E	I	Q	K	Y	K	E	V	S	D	K	T	I	R	T	L	I	T	R	L	Y	K	K	E	I	I	K	R	Y	K	S	E	N	I	Y	F	Y
Template Known Secondary structure								S	S	S												T	T	S																	T	T	S							T	T
Template Predicted Secondary structure
Template SS confidence
		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions