 |
Job Description | P39410 | Confidence | 46.07% | Date | Thu Jan 5 12:00:47 GMT 2012 |
Rank | 310 | Aligned Residues | 55 |
% Identity | 20% | Template | c3csvA_ |
PDB info |
PDB header:transferase | Chain: A: PDB Molecule:aminoglycoside phosphotransferase; |
PDBTitle: crystal structure of a putative aminoglycoside phosphotransferase2 (yp_614837.1) from silicibacter sp. tm1040 at 2.15 a resolution
|
Resolution | 2.15 Å |
|
 |
  |   |
217 | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
S | G | N | K | H | V | L | V | K | F | T | V | P | Q | Q | T | A | V | S | Q | R | W | G | D | L | L | I | A | E | S | I | A | A | Q | I | L | R | D | G | G | I | H | A | I | E | S | T | V | L | V | T | S | N | R | Q | V | F | L | E | A | E | R | F | D |
Query Conservation |   |
  |   |   |   |   |   |
|
|
|
|   |   |   |   |
|   |   |   |   |   |
|   |   |
|
|   |   |   |
|   |   |   |
|   |
|
|   |   |   |
|
|   |
|
|   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |
|
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |   |   |
|
|   |   |   |   |
|   |   |   |   |   |   |   |   | . | . | . | . | . | . | . |
|   |   |
|   |   |   |
|   |   |   |
|
|   |
|
|   | . | . |
|
|
|   |
|   |   |   |
|   |
|
|
|
|
|
|
|
Template Sequence |   |
P | T | G | A | K | A | V | L | X | D | W | S | P | E | E | G | G | D | T | Q | P | . |
. |
. |
. |
. |
. |
. |
F | V | D | L | A | Q | Y | L | R | N | L | D | I | S | A | P | E | . |
. |
I | Y | A | E | E | H | A | R | G | L | L | L | I | E | D | L | G |
Template Known Secondary structure |   |
T | T |
|
|  |  |  |  |  |  |
|
| T | T | T | T |
|
| S |  |  | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  | T | T |
| B |
|
|
| . | . |  |  |  |  |  | T | T | T | T |  |  |  |  |
|
|
|
|
Template Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  | . | . |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | |
|
|
|
|
|
|
. | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | |
|
. | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|