Job Description P39410 Confidence 85.80% Date Thu Jan 5 12:00:47 GMT 2012 Rank 123 Aligned Residues 44 % Identity 23% Template c2xroE_ PDB info PDB header:dna-binding protein/dna Chain: E: PDB Molecule:hth-type transcriptional regulator ttgv; PDBTitle: crystal structure of ttgv in complex with its dna operator Resolution 3.40 Å

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		4	.	.	.	.	.	10	.		.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.				.	.	.	.	.	40	.	.	.	.	.	.	.
Predicted Secondary structure										.																								.	.	.
Query SS confidence										.																								.	.	.
Query Sequence		L	T	D	L	L	L	Q	G	.	P	R	S	A	P	E	L	R	Q	R	L	A	I	S	Q	A	T	F	S	R	L	V	A	.	.	.	R	E	D	R	V	I	R	F	G	K	A	R	A
Query Conservation										.																								.	.	.
Alig confidence										.																								.	.	.
Template Conservation
Template Sequence		M	R	A	L	G	S	H	P	H	G	L	S	L	A	A	I	A	Q	L	V	G	L	P	R	S	T	V	Q	R	I	I	N	A	L	E	E	E	F	L	V	E	A	L	G	P	A	G	G
Template Known Secondary structure									T	T		B									S	S															T	T	T	S					S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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