 |
| Job Description | P39410 | | Confidence | 75.18% | Date | Thu Jan 5 12:00:47 GMT 2012 |
| Rank | 223 | Aligned Residues | 31 |
| % Identity | 23% | Template | c2ebyA_ |
| PDB info |
PDB header:transcription | Chain: A: PDB Molecule:putative hth-type transcriptional regulator ybaq; |
PDBTitle: crystal structure of a hypothetical protein from e. coli
|
| Resolution | 2.25 Å |
|
| | |
4 | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . |
| Predicted Secondary structure | |
 | | | | | | |
|
|
|
| | | | | | | | |
|
|
| | | | | | | | | |
| Query SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence | |
L | T | D | L | L | L | Q | G | P | R | S | A | P | E | L | R | Q | R | L | A | I | S | Q | A | T | F | S | R | L | V | A |
| Query Conservation | |
| | | | | | | | | | | | | | | | | | | | |
| | | | |
|
| | | |
| Alig confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation | |
| |
| |
| | | |
|
|
|
| |
|
|
| | | |
|
|
| | | |
|
| | |
| |
| Template Sequence | |
L | Y | E | Y | L | E | P | L | D | L | K | I | N | E | L | A | E | L | L | H | V | H | R | N | S | V | S | A | L | I | N |
| Template Known Secondary structure | |
| | | T | T | T | T | T | T |
|
| | | | | | | | | T | S |
| | | | | | | | | T |
| Template Predicted Secondary structure | |
| | | | | | |
|
|
|
| | | | | | | | |
|
|
| | | | | | | | | |
| Template SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| | |
23 | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . |
| |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
| |
|
|
|
