 |
Job Description | P39410 | Confidence | 62.77% | Date | Thu Jan 5 12:00:47 GMT 2012 |
Rank | 276 | Aligned Residues | 38 |
% Identity | 16% | Template | c2di3A_ |
PDB info |
PDB header:transcription | Chain: A: PDB Molecule:bacterial regulatory proteins, gntr family; |
PDBTitle: crystal structure of the transcriptional factor cgl29152 from corynebacterium glutamicum
|
Resolution | 2.05 Å |
|
  |   |
12 | . | . | . | |
. | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | |
. | . | . | |
. | . | 40 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|  | . |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  | . |
|
|
| . |
|  |  |  |  |
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
P | R | S | A | . |
P | E | L | R | Q | R | L | A | I | S | Q | A | T | F | S | R | L | V | A | . |
R | E | D | . |
R | V | I | R | F | G | K | A | R | A | T | R |
Query Conservation |   |
  |   |   |   | . |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|
|   |   |   | . |   |   |   | . |   |
|   |   |   |
|   |   |   |   |   |   |
Alig confidence |   |
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|
|
|   |   |
|
|   |   |   |
|
|
|
|   |
|
|
|
|
|
|   |   |
|   |   |   |
|
|
|   |   |   |   |   |   |
|   |   |
Template Sequence |   |
H | L | P | S | E | R | A | L | S | E | T | L | G | V | S | R | S | S | L | R | E | A | L | R | V | L | E | A | L | G | T | I | S | T | A | T | G | S | G | P | R |
Template Known Secondary structure |   |
B |
|
|
|  |  |  |  |  |  |  |  | T |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | S |  |  |
|
| S | T | T | S | G | G |
Template Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|
|
|  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
27 | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|