Return to main results Retrieve Phyre Job Id

Job DescriptionP09980
Confidence98.42%DateThu Jan 5 11:02:33 GMT 2012
Rank39Aligned Residues91
% Identity18%Templatec3tmiA_
PDB info PDB header:hydrolase/rnaChain: A: PDB Molecule:atp-dependent rna helicase ddx58; PDBTitle: structural basis for rna recognition and activation of rig-i
Resolution2.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  MRLNPGQQQAVEF. . VTGPCLVLAGAGSGKTRVITNKIAHLIRGCGYQ. ARHIAAVTFTNKAAREMKERVGQTLGRKEA.
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Template Sequence  FKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIPVYEQQKSVFSKYFERHGYR
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   241........250.........260.........270.........280.........290.........300.........310.........320
 
   77..80.........90.
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Query Sequence  . . . . . . . . . . . . . . . . . . . . RGLMISTFHTLGLDI
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Template Sequence  VTGISGATAENVPVEQIVENNDIIILTPQILVNNL
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   321........330.........340.........350.....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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