Job Description P09980 Confidence 98.44% Date Thu Jan 5 11:02:33 GMT 2012 Rank 38 Aligned Residues 83 % Identity 16% Template c2z0mA_ PDB info PDB header:rna binding protein Chain: A: PDB Molecule:337aa long hypothetical atp-dependent rna PDBTitle: crystal structure of hypothetical atp-dependent rna2 helicase from sulfolobus tokodaii Resolution 1.90 Å

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		2	.	.	.	.	.	.	.	10	.	.	.			.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure														.	.
Query SS confidence														.	.
Query Sequence		R	L	N	P	G	Q	Q	Q	A	V	E	F	.	.	V	T	G	P	C	L	V	L	A	G	A	G	S	G	K	T	R	V	I	T	N	K	I	A	H	L	I	R	G	C	G	Y	Q	A	R	H	I	A	A	V	T	F	T	N	K	A	A	R	E	M	K	E	R	V	G	Q	T	L	G	R	K	E	A	R	G	L
Query Conservation														.	.
Alig confidence														.	.																				.	.	.										.	.	.	.
Template Conservation																																			.	.	.										.	.	.	.
Template Sequence		N	F	T	E	V	Q	S	K	T	I	P	L	M	L	Q	G	K	N	V	V	V	R	A	K	T	G	S	G	K	T	A	A	Y	.	.	.	A	I	P	I	L	E	L	G	M	.	.	.	.	K	S	L	V	V	T	P	T	R	E	L	T	R	Q	V	A	S	H	I	R	D	I	G	R	Y	M	D	T	K	V	A
Template Known Secondary structure		S														T	T									T	T	S	S						.	.	.								T		.	.	.	.							S	S															T	T	T	S
Template Predicted Secondary structure																																			.	.	.										.	.	.	.
Template SS confidence
		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.				.	50	.	.	.	.	.	.	.					.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
		80	.	.	.	.	.	.	.	.	.	90	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	I	S	T	F	H	T	L	G	L	D	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	V	Y	G	G	M	P	Y	K	A	Q	I
Template Known Secondary structure					T	T	S
Template Predicted Secondary structure
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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